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Comment: Comment: Converting GFA to rGFA
9 months ago by Ric ▴ 440
0
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1
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1.2k
views
Comment: Comment: Converting GFA to rGFA
9 months ago by Ric ▴ 440
3
votes
5
replies
1.2k
views
Converting GFA to rGFA
gfa
9 months ago by Ric ▴ 440
2
votes
1
reply
727
views
RNA-Seq expression analysis
RNA-seq nextflow heatmap gene-expression
updated 16 months ago by ★ 3.0k • written 16 months ago by ▴ 440
0
votes
1
reply
1.2k
views
Polishing PacBio or ONT with Illumina
pacbio polish ONT illumina
updated 2.3 years ago by • 0 • written 3.6 years ago by ▴ 440
4
votes
6
replies
2.7k
views
Removing a DOT after each sequence
sequence bioawk
updated 2.3 years ago by ▴ 930 • written 4.6 years ago by ▴ 440
0
votes
1
reply
861
views
expansions and contractions from OrthoFinder
protein python orthofinder
updated 2.4 years ago by ▴ 260 • written 2.4 years ago by ▴ 440
0
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1
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1.3k
views
Comment: Comment: Manually order the set fails in UpsetR
2.5 years ago by Ric ▴ 440
0
votes
4
replies
1.3k
views
Manually order the set fails in UpsetR
r ggplot2 upsetr
updated 2.5 years ago by 45k • written 2.5 years ago by ▴ 440
1
vote
3
replies
1.4k
views
UpSetR plot of Orthofinder results failed
upsetR r orthofinder plot
updated 2.6 years ago by 12k • written 2.6 years ago by ▴ 440
0
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0
replies
3.1k
views
Comment: Comment: Upset plot using python
2.6 years ago by Ric ▴ 440
4
votes
2
replies
3.1k
views
Upset plot using python
python orthofinder upset
2.6 years ago by Ric ▴ 440
0
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0
replies
5.4k
views
Comment: Comment: map gene gain loss on species tree
2.6 years ago by Ric ▴ 440
0
votes
2
replies
1.2k
views
Iso-seq mapping and annotation
alignment mapping iso-seq annotation
updated 3.4 years ago by ▴ 510 • written 3.4 years ago by ▴ 440
0
votes
1
reply
853
views
Could not find <WellSample> in input dataset. Will not add BioSamples to output XMLs
rna pacbio ccs iso-seq lima
updated 3.4 years ago by ▴ 510 • written 3.4 years ago by ▴ 440
6
votes
16
replies
6.6k
views
10 follow
Annotation pipelines in 2018
assembly RNA-Seq genome gene
updated 3.4 years ago by ▴ 110 • written 6.9 years ago by ▴ 440
0
votes
0
replies
1.2k
views
Comment: Comment: SnpEff does not create htmlStats
3.5 years ago by Ric ▴ 440
0
votes
2
replies
1.2k
views
SnpEff does not create htmlStats
snpeff snps
3.5 years ago by Ric ▴ 440
0
votes
1
reply
3.3k
views
Comment: Comment: diamond seems to run out of memory
3.6 years ago by Ric ▴ 440
0
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0
replies
3.3k
views
Comment: Comment: diamond seems to run out of memory
3.6 years ago by Ric ▴ 440
0
votes
2
replies
3.3k
views
Comment: Comment: diamond seems to run out of memory
3.6 years ago by Ric ▴ 440
3
votes
7
replies
3.3k
views
diamond seems to run out of memory
alignment gene
updated 3.6 years ago by ▴ 250 • written 3.6 years ago by ▴ 440
1
vote
1
reply
1.2k
views
How to train annotations tools
genome annotation gene
updated 3.7 years ago by 8.8k • written 3.7 years ago by ▴ 440
0
votes
1
reply
898
views
overlaps between subfeatures in the underlying annotation
annotation gene
updated 3.7 years ago by 15k • written 3.7 years ago by ▴ 440
0
votes
2
replies
1.3k
views
Protein filtering for annotation
genbank annotation gene
updated 3.7 years ago by 15k • written 3.7 years ago by ▴ 440
1
vote
1
reply
806
views
Avoiding Manual Gene Curation
annotation gene
updated 3.7 years ago by 152k • written 3.7 years ago by ▴ 440
2
votes
1
reply
1.0k
views
Retrieving sequences and Blast them
blast
updated 3.8 years ago by 8.8k • written 3.8 years ago by ▴ 440
0
votes
1
reply
1.3k
views
Comment: Comment: plant viruses sequences
3.9 years ago by Ric ▴ 440
2
votes
3
replies
1.3k
views
plant viruses sequences
alignment gene
updated 3.9 years ago by 152k • written 3.9 years ago by ▴ 440
0
votes
0
replies
720
views
tree in newick format for
gene newick MCScanX
4.1 years ago by Ric ▴ 440
1
vote
1
reply
3.4k
views
sam_hrecs_error Malformed key:value pair
alignment
updated 4.2 years ago by 152k • written 5.4 years ago by ▴ 440
2
votes
1
reply
5.7k
views
Comment: C: Running r8s on Unix system
4.3 years ago by Ric ▴ 440
0
votes
1
reply
1.1k
views
exon skipping and intron retention analyse
RNA-Seq alignment gene
updated 4.2 years ago by • 0 • written 4.4 years ago by ▴ 440
5
votes
3
replies
2.3k
views
comparing annotations between genomes.
annotation gff liftOver CrossMap
updated 4.6 years ago by ▴ 20 • written 7.5 years ago by ▴ 440
0
votes
0
replies
1.8k
views
Comment: C: bcftools for plant SNPs
4.6 years ago by Ric ▴ 440
1
vote
2
replies
1.8k
views
bcftools for plant SNPs
SNP sequence
updated 4.6 years ago by 166k • written 4.6 years ago by ▴ 440
0
votes
0
replies
1.6k
views
bcf: unknown file type
snp
updated 4.6 years ago by 166k • written 4.6 years ago by ▴ 440
0
votes
1
reply
2.7k
views
Comment: C: Removing a DOT after each sequence
4.6 years ago by Ric ▴ 440
1
vote
1
reply
1.4k
views
GO annotations into GFF3
annotation go
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 440
0
votes
1
reply
2.0k
views
Comment: C: Reactome Plant to Cytoscape - possible?
4.8 years ago by Ric ▴ 440
0
votes
0
replies
895
views
Reactome for Plants
pathway gene annotation
4.8 years ago by Ric ▴ 440
0
votes
1
reply
1.6k
views
Comment: C: InterProScan for Plants
4.8 years ago by Ric ▴ 440
0
votes
0
replies
725
views
Non redundant ID associating with GO and Pathway
alignment GO pathway
4.8 years ago by Ric ▴ 440
0
votes
3
replies
1.6k
views
InterProScan for Plants
gene protein annotation pathways ontology
4.8 years ago by Ric ▴ 440
0
votes
1
reply
945
views
Finding common and different genes between species
RNA-Seq gene annotation
4.8 years ago by Ric ▴ 440
2
votes
2
replies
1.3k
views
pathway analysis in plants
Assembly gene annotation analysis pathway
updated 4.8 years ago by ★ 1.1k • written 4.8 years ago by ▴ 440
2
votes
2
replies
1.3k
views
annotation with Augustus
gene genome annotation augustus
4.9 years ago by Ric ▴ 440
2
votes
1
reply
1.3k
views
Answer: A: annotation with Augustus
4.9 years ago by Ric ▴ 440
2
votes
1
reply
1.3k
views
Failed to merge BAM files
bash samtools
updated 4.9 years ago by ▴ 540 • written 4.9 years ago by ▴ 440
0
votes
0
replies
1.4k
views
orthomcl to venn diagram
orthomcl family genes ortholog venn diagram
5.0 years ago by Ric ▴ 440
295 results • Page 1 of 6
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