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0
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0
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641
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Comment: Comment: Converting GFA to rGFA
3 months ago by Ric ▴ 440
0
votes
1
reply
641
views
Comment: Comment: Converting GFA to rGFA
3 months ago by Ric ▴ 440
3
votes
5
replies
641
views
Converting GFA to rGFA
gfa
3 months ago by Ric ▴ 440
2
votes
1
reply
540
views
RNA-Seq expression analysis
RNA-seq nextflow heatmap gene-expression
updated 10 months ago by ★ 2.5k • written 10 months ago by ▴ 440
0
votes
1
reply
991
views
Polishing PacBio or ONT with Illumina
pacbio polish ONT illumina
updated 21 months ago by • 0 • written 3.0 years ago by ▴ 440
4
votes
6
replies
2.3k
views
Removing a DOT after each sequence
sequence bioawk
updated 21 months ago by ▴ 930 • written 4.1 years ago by ▴ 440
0
votes
1
reply
662
views
expansions and contractions from OrthoFinder
protein python orthofinder
updated 22 months ago by ▴ 260 • written 22 months ago by ▴ 440
0
votes
1
reply
1.0k
views
Comment: Comment: Manually order the set fails in UpsetR
24 months ago by Ric ▴ 440
0
votes
4
replies
1.0k
views
Manually order the set fails in UpsetR
r ggplot2 upsetr
updated 24 months ago by 44k • written 24 months ago by ▴ 440
1
vote
3
replies
1.1k
views
UpSetR plot of Orthofinder results failed
upsetR r orthofinder plot
updated 2.0 years ago by 12k • written 2.0 years ago by ▴ 440
0
votes
0
replies
2.5k
views
Comment: Comment: Upset plot using python
2.1 years ago by Ric ▴ 440
4
votes
2
replies
2.5k
views
Upset plot using python
python orthofinder upset
2.1 years ago by Ric ▴ 440
0
votes
0
replies
5.0k
views
Comment: Comment: map gene gain loss on species tree
2.1 years ago by Ric ▴ 440
0
votes
2
replies
1.0k
views
Iso-seq mapping and annotation
alignment mapping iso-seq annotation
updated 2.8 years ago by ▴ 330 • written 2.9 years ago by ▴ 440
0
votes
1
reply
675
views
Could not find <WellSample> in input dataset. Will not add BioSamples to output XMLs
rna pacbio ccs iso-seq lima
updated 2.8 years ago by ▴ 330 • written 2.8 years ago by ▴ 440
6
votes
16
replies
6.0k
views
10 follow
Annotation pipelines in 2018
assembly RNA-Seq genome gene
updated 2.9 years ago by ▴ 110 • written 6.3 years ago by ▴ 440
0
votes
0
replies
983
views
Comment: Comment: SnpEff does not create htmlStats
3.0 years ago by Ric ▴ 440
0
votes
2
replies
983
views
SnpEff does not create htmlStats
snpeff snps
3.0 years ago by Ric ▴ 440
0
votes
1
reply
2.9k
views
Comment: Comment: diamond seems to run out of memory
3.1 years ago by Ric ▴ 440
0
votes
0
replies
2.9k
views
Comment: Comment: diamond seems to run out of memory
3.1 years ago by Ric ▴ 440
0
votes
2
replies
2.9k
views
Comment: Comment: diamond seems to run out of memory
3.1 years ago by Ric ▴ 440
3
votes
7
replies
2.9k
views
diamond seems to run out of memory
alignment gene
updated 3.1 years ago by ▴ 250 • written 3.1 years ago by ▴ 440
1
vote
1
reply
986
views
How to train annotations tools
genome annotation gene
updated 3.1 years ago by 8.8k • written 3.1 years ago by ▴ 440
0
votes
1
reply
756
views
overlaps between subfeatures in the underlying annotation
annotation gene
updated 3.1 years ago by 15k • written 3.1 years ago by ▴ 440
0
votes
2
replies
1.1k
views
Protein filtering for annotation
genbank annotation gene
updated 3.2 years ago by 15k • written 3.2 years ago by ▴ 440
1
vote
1
reply
662
views
Avoiding Manual Gene Curation
annotation gene
updated 3.2 years ago by 147k • written 3.2 years ago by ▴ 440
2
votes
1
reply
834
views
Retrieving sequences and Blast them
blast
updated 3.2 years ago by 8.8k • written 3.2 years ago by ▴ 440
0
votes
1
reply
1.1k
views
Comment: Comment: plant viruses sequences
3.4 years ago by Ric ▴ 440
2
votes
3
replies
1.1k
views
plant viruses sequences
alignment gene
updated 3.4 years ago by 147k • written 3.4 years ago by ▴ 440
0
votes
0
replies
590
views
tree in newick format for
gene newick MCScanX
3.5 years ago by Ric ▴ 440
1
vote
1
reply
3.1k
views
sam_hrecs_error Malformed key:value pair
alignment
updated 3.6 years ago by 147k • written 4.9 years ago by ▴ 440
2
votes
1
reply
5.1k
views
Comment: C: Running r8s on Unix system
3.8 years ago by Ric ▴ 440
0
votes
1
reply
926
views
exon skipping and intron retention analyse
RNA-Seq alignment gene
updated 3.7 years ago by • 0 • written 3.8 years ago by ▴ 440
5
votes
3
replies
2.1k
views
comparing annotations between genomes.
annotation gff liftOver CrossMap
updated 4.1 years ago by ▴ 20 • written 7.0 years ago by ▴ 440
0
votes
0
replies
1.6k
views
Comment: C: bcftools for plant SNPs
4.1 years ago by Ric ▴ 440
1
vote
2
replies
1.6k
views
bcftools for plant SNPs
SNP sequence
updated 4.1 years ago by 164k • written 4.1 years ago by ▴ 440
0
votes
0
replies
1.4k
views
bcf: unknown file type
snp
updated 4.1 years ago by 164k • written 4.1 years ago by ▴ 440
0
votes
1
reply
2.3k
views
Comment: C: Removing a DOT after each sequence
4.1 years ago by Ric ▴ 440
1
vote
1
reply
1.2k
views
GO annotations into GFF3
annotation go
updated 4.1 years ago by 13k • written 4.1 years ago by ▴ 440
0
votes
1
reply
1.6k
views
Comment: C: Reactome Plant to Cytoscape - possible?
4.2 years ago by Ric ▴ 440
0
votes
0
replies
775
views
Reactome for Plants
pathway gene annotation
4.2 years ago by Ric ▴ 440
0
votes
1
reply
1.3k
views
Comment: C: InterProScan for Plants
4.2 years ago by Ric ▴ 440
0
votes
0
replies
623
views
Non redundant ID associating with GO and Pathway
alignment GO pathway
4.2 years ago by Ric ▴ 440
0
votes
3
replies
1.3k
views
InterProScan for Plants
gene protein annotation pathways ontology
4.3 years ago by Ric ▴ 440
0
votes
1
reply
807
views
Finding common and different genes between species
RNA-Seq gene annotation
4.3 years ago by Ric ▴ 440
2
votes
2
replies
1.1k
views
pathway analysis in plants
Assembly gene annotation analysis pathway
updated 4.3 years ago by ★ 1.1k • written 4.3 years ago by ▴ 440
2
votes
2
replies
1.2k
views
annotation with Augustus
gene genome annotation augustus
4.3 years ago by Ric ▴ 440
2
votes
1
reply
1.2k
views
Answer: A: annotation with Augustus
4.3 years ago by Ric ▴ 440
2
votes
1
reply
1.1k
views
Failed to merge BAM files
bash samtools
updated 4.4 years ago by ▴ 540 • written 4.4 years ago by ▴ 440
0
votes
0
replies
1.3k
views
orthomcl to venn diagram
orthomcl family genes ortholog venn diagram
4.4 years ago by Ric ▴ 440
295 results • Page 1 of 6
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