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Comment: C: Create de novo repeat library
4.9 years ago by Ric ▴ 440
0
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0
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2.0k
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Comment: C: StringTie output to train Augustus
4.9 years ago by Ric ▴ 440
0
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1
reply
778
views
StringTie required filtered BAM
RNA-Seq gene annotation assembly
updated 4.9 years ago by ★ 4.1k • written 4.9 years ago by ▴ 440
0
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1
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2.0k
views
Comment: C: StringTie output to train Augustus
4.9 years ago by Ric ▴ 440
2
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4
replies
2.0k
views
StringTie output to train Augustus
gene annotation
4.9 years ago by Ric ▴ 440
0
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1
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12k
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Comment: C: Create de novo repeat library
4.9 years ago by Ric ▴ 440
0
votes
1
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12k
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Comment: C: Create de novo repeat library
5.0 years ago by Ric ▴ 440
4
votes
5
replies
1.9k
views
Repeats detection in a genome
Assembly genome annotation
updated 5.0 years ago by 9.1k • written 5.0 years ago by ▴ 440
0
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0
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1.9k
views
Comment: C: Repeats detection in a genome
5.0 years ago by Ric ▴ 440
0
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2
replies
1.1k
views
sparsehash FATAL ERROR: failed to allocate 19 groups
abyss Assembly
updated 5.0 years ago by ▴ 50 • written 5.0 years ago by ▴ 440
9
votes
10
replies
4.7k
views
how to adjust BAM header after extracting only mapped reads from BAM files
bam samtools
updated 5.0 years ago by ★ 1.5k • written 7.7 years ago by ▴ 440
0
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1
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1.8k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
5.0 years ago by Ric ▴ 440
0
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1
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1.8k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
5.0 years ago by Ric ▴ 440
0
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7
replies
1.8k
views
gff3_sp_complement_annotations.pl parameter settings
gene annotation
5.0 years ago by Ric ▴ 440
0
votes
0
replies
1.1k
views
no unique mapped paired-end reads in BAM file
alignment ngs sequencing
5.1 years ago by Ric ▴ 440
0
votes
1
reply
1.2k
views
samtools merge not working
samtools alignment next-gen sequencing
updated 5.1 years ago by 165k • written 5.1 years ago by ▴ 440
0
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1
reply
3.1k
views
Comment: C: How to retrieve from a GFF3 file a AA and CDS files
5.1 years ago by Ric ▴ 440
0
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0
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1.8k
views
Comment: C: gff3_sp_complement_annotations.pl parameter settings
5.1 years ago by Ric ▴ 440
0
votes
4
replies
3.1k
views
How to retrieve from a GFF3 file a AA and CDS files
gene annotation
updated 5.1 years ago by 9.1k • written 5.1 years ago by ▴ 440
0
votes
22
replies
5.0k
views
changing ID in an existing GFF3 file
gene annotation
updated 5.1 years ago by 15k • written 5.2 years ago by ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: How to retrieve from a GFF3 file a AA and CDS files
5.1 years ago by Ric ▴ 440
0
votes
0
replies
1.3k
views
Comment: C: only unique mapped paired-end reads
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
1.3k
views
Comment: C: only unique mapped paired-end reads
5.1 years ago by Ric ▴ 440
0
votes
4
replies
1.3k
views
only unique mapped paired-end reads
alignment next-gen sequence
5.1 years ago by Ric ▴ 440
0
votes
0
replies
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
2
replies
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
0
votes
1
reply
5.0k
views
Comment: C: changing ID in an existing GFF3 file
5.1 years ago by Ric ▴ 440
1
vote
0
replies
1.9k
views
Comment: C: BBmap caused Not in GZIP format
5.1 years ago by Ric ▴ 440
2
votes
2
replies
1.9k
views
BBmap caused Not in GZIP format
bbmap sequencing
5.1 years ago by Ric ▴ 440
0
votes
0
replies
1.3k
views
Comment: C: creating tag count file
5.2 years ago by Ric ▴ 440
0
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1
reply
1.3k
views
Comment: C: creating tag count file
5.2 years ago by Ric ▴ 440
0
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0
replies
1.3k
views
Comment: C: creating tag count file
5.2 years ago by Ric ▴ 440
0
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7
replies
1.3k
views
creating tag count file
RNA-Seq
5.2 years ago by Ric ▴ 440
0
votes
1
reply
2.0k
views
Comment: C: extracting unmapped reads from PAF file
5.2 years ago by Ric ▴ 440
1
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3
replies
2.0k
views
extracting unmapped reads from PAF file
alignment mapping
5.2 years ago by Ric ▴ 440
0
votes
1
reply
1.3k
views
Comment: C: creating tag count file
5.2 years ago by Ric ▴ 440
0
votes
0
replies
1.4k
views
Comment: C: intersecting two GFF3 missing data from the second file
5.2 years ago by Ric ▴ 440
0
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1
reply
1.4k
views
Comment: C: intersecting two GFF3 missing data from the second file
5.2 years ago by Ric ▴ 440
1
vote
3
replies
8.8k
views
counting the number of reads in FASTQ files
next-gen sequencing coverage
updated 5.3 years ago by 14k • written 5.3 years ago by ▴ 440
0
votes
1
reply
19k
views
Comment: C: BWA mem on multiple samples
updated 5.3 years ago by 44k • written 9.5 years ago by ▴ 440
0
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5
replies
1.4k
views
intersecting two GFF3 missing data from the second file
annotation bedtools genome
5.3 years ago by Ric ▴ 440
0
votes
1
reply
989
views
Removing adapters for assembly
abyss assembly
updated 5.3 years ago by ★ 29k • written 5.3 years ago by ▴ 440
1
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2
replies
1.7k
views
average distance between genes
assembly gene annotation
updated 5.4 years ago by 36k • written 5.5 years ago by ▴ 440
295 results • Page 2 of 6
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