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23k
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Answer: Answer: VCF To FASTA
6 months ago by Jorge Amigo 14k
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0
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122k
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Comment: Comment: How To Split A Bam File By Chromosome
15 months ago by Jorge Amigo 14k
5
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0
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666
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Answer: Answer: what is IGV visualization lighter color variants stand for
21 months ago by Jorge Amigo 14k
1
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0
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925
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Comment: Comment: Count values based on condition
2.6 years ago by Jorge Amigo 14k
1
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0
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925
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Answer: Answer: Count values based on condition
2.6 years ago by Jorge Amigo 14k
21
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11
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21k
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9 follow
How To Split A .Vcf.Gz File
vcf split vcftools
updated 5.3 years ago by 44k • written 13.9 years ago by 14k
3
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0
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1.5k
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Answer: Answer: How to distinguish INDELs from SNPs.
3.1 years ago by Jorge Amigo 14k
1
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0
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2.1k
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Answer: Answer: Detecting chromosone notation in vcf files
3.1 years ago by Jorge Amigo 14k
0
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0
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16k
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Comment: Comment: Split a VCF file into individual sample files
3.2 years ago by Jorge Amigo 14k
0
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1
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16k
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Comment: Comment: Split a VCF file into individual sample files
3.3 years ago by Jorge Amigo 14k
0
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1
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253k
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Comment: Comment: Tools To Calculate Average Coverage For A Bam File?
3.3 years ago by Jorge Amigo 14k
0
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0
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2.3k
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Comment: Comment: Change chromosome notation in dbSNP VCF file
3.4 years ago by Jorge Amigo 14k
0
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1
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975
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Comment: Comment: Where can I find VCF files of the same source
3.4 years ago by Jorge Amigo 14k
2
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0
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1.6k
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Answer: Answer: How to adjust sequence line to 60bp?
3.4 years ago by Jorge Amigo 14k
0
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0
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927
views
Answer: Answer: Platypus
3.4 years ago by Jorge Amigo 14k
3
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1
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1.4k
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Answer: Answer: Convert a VCF-file in a user specific Format
3.4 years ago by Jorge Amigo 14k
0
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2
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122k
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Comment: Comment: How To Split A Bam File By Chromosome
3.4 years ago by Jorge Amigo 14k
0
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1
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122k
views
Comment: Comment: How To Split A Bam File By Chromosome
3.4 years ago by Jorge Amigo 14k
3
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1
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1.2k
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Answer: Answer: Count number of occurrences an annotation in a multisample vcf split into multip
3.5 years ago by Jorge Amigo 14k
0
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1
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2.2k
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Comment: Comment: How to filter gnomADe_AF < 0.001 with unix?
3.5 years ago by Jorge Amigo 14k
0
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0
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1.5k
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Comment: Comment: annotate sites with gene info
3.5 years ago by Jorge Amigo 14k
2
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1
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1.7k
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Answer: Answer: Sum up value within a interval
3.5 years ago by Jorge Amigo 14k
2
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0
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38k
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Comment: Comment: [main_samview] fail to read the header from sample.bam
3.5 years ago by Jorge Amigo 14k
0
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1
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1.5k
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Answer: Answer: annotate sites with gene info
3.5 years ago by Jorge Amigo 14k
3
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0
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5.7k
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Answer: Answer: How to generate start & end coordinates for each chromosome of human ref genome
3.5 years ago by Jorge Amigo 14k
1
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0
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3.3k
views
Answer: Answer: Extract chromosome 1 - 22 ,X and Y from BAM file
3.6 years ago by Jorge Amigo 14k
2
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1
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1.2k
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Answer: Answer: How do I write the regex expression for the line?
3.6 years ago by Jorge Amigo 14k
0
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0
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2.2k
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Comment: Comment: alignement and Variant calling with BWA and samtools
3.6 years ago by Jorge Amigo 14k
0
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1
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3.6k
views
Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
3.6 years ago by Jorge Amigo 14k
1
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1
reply
3.6k
views
Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
3.6 years ago by Jorge Amigo 14k
1
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1
reply
2.9k
views
Answer: Answer: Installing Bedtools with Cygwin fails.
3.6 years ago by Jorge Amigo 14k
0
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1
reply
1.3k
views
Comment: Comment: How to capture the position of SNPs from the gene's locations
3.6 years ago by Jorge Amigo 14k
0
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0
replies
1.2k
views
Answer: Answer: Find all genes in multiple regions
3.6 years ago by Jorge Amigo 14k
2
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1
reply
1.3k
views
Answer: Answer: How to capture the position of SNPs from the gene's locations
3.6 years ago by Jorge Amigo 14k
2
votes
1
reply
3.6k
views
Answer: Answer: Bamtools stats and samtools flagstat produce different results and confusing my
3.6 years ago by Jorge Amigo 14k
0
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0
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1.6k
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Comment: Comment: Comparing fastq files
3.6 years ago by Jorge Amigo 14k
0
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0
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3.2k
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Comment: Comment: How to filter a vcf file based on genotype of first two samples
3.6 years ago by Jorge Amigo 14k
0
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1
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3.2k
views
Comment: Comment: How to filter a vcf file based on genotype of first two samples
3.6 years ago by Jorge Amigo 14k
1
vote
1
reply
2.6k
views
Answer: Answer: How do I interpret a 200bp reduction of coverage in a gene exon?
3.7 years ago by Jorge Amigo 14k
5
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1
reply
3.2k
views
Answer: Answer: How to filter a vcf file based on genotype of first two samples
3.7 years ago by Jorge Amigo 14k
1
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0
replies
3.2k
views
Comment: Comment: How to filter a vcf file based on genotype of first two samples
3.7 years ago by Jorge Amigo 14k
0
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0
replies
6.5k
views
Comment: Comment: How to convert maf to vcf while retaining original mutation notations?
3.7 years ago by Jorge Amigo 14k
1
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1
reply
6.5k
views
Answer: Answer: How to convert maf to vcf while retaining original mutation notations?
3.7 years ago by Jorge Amigo 14k
1
vote
1
reply
2.2k
views
Answer: Answer: alignement and Variant calling with BWA and samtools
3.7 years ago by Jorge Amigo 14k
2
votes
1
reply
3.2k
views
Answer: Answer: How to filter a vcf file based on genotype of first two samples
3.7 years ago by Jorge Amigo 14k
1
vote
0
replies
1.1k
views
Answer: Answer: SNP count in a set of genomic regions
3.7 years ago by Jorge Amigo 14k
1
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0
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945
views
Answer: Answer: two allele frequency
3.7 years ago by Jorge Amigo 14k
2
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0
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3.1k
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Answer: Answer: 1000G Tabix download: EOF marker is absent
3.7 years ago by Jorge Amigo 14k
0
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0
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3.5k
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Answer: Answer: How to get SNPs genotype matrix from vcf file for JoinMap analysis?
3.7 years ago by Jorge Amigo 14k
0
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0
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2.1k
views
Answer: Answer: ExomeDepth negative BF (bayesian factor) values meaning
3.7 years ago by Jorge Amigo 14k
882 results • Page 1 of 18
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