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Comment: Comment: demultiplex paired end fastq file with mixed samples with barcode
3.8 years ago by hellocita ▴ 40
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3
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2.5k
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demultiplex paired end fastq file with mixed samples with barcode
RNAseq fastq demultiplex
updated 3.8 years ago by 149k • written 3.8 years ago by ▴ 40
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Comment: Comment: why my volcano plot looks strange?
3.8 years ago by hellocita ▴ 40
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1
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3.6k
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Comment: Comment: why my volcano plot looks strange?
3.8 years ago by hellocita ▴ 40
2
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6
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3.6k
views
why my volcano plot looks strange?
wilcox.test RNAseq Metabolomics LCMS
updated 3.8 years ago by 21k • written 3.8 years ago by ▴ 40
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1.5k
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Comment: C: Gene ID problems when mapping and counting
3.9 years ago by hellocita ▴ 40
4
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4
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1.5k
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Gene ID problems when mapping and counting
RNA-Seq
3.9 years ago by hellocita ▴ 40
0
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1
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1.8k
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Comment: C: should I merge several SRR fastq file download from sra?
3.9 years ago by hellocita ▴ 40
0
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1
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1.8k
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Comment: C: should I merge several SRR fastq file download from sra?
3.9 years ago by hellocita ▴ 40
3
votes
6
replies
1.8k
views
should I merge several SRR fastq file download from sra?
RNA-Seq
updated 3.9 years ago by 15k • written 3.9 years ago by ▴ 40
2
votes
2
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1.5k
views
problem with download fastq file from SRA
RNA-Seq
updated 3.9 years ago by 149k • written 3.9 years ago by ▴ 40
0
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0
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2.6k
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Comment: C: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
5.9 years ago by hellocita ▴ 40
0
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1
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2.6k
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Comment: C: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
5.9 years ago by hellocita ▴ 40
3
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5
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2.6k
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should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential expression analysis
RNA-Seq rna-seq
updated 20 months ago by ▴ 90 • written 5.9 years ago by ▴ 40
0
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1
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1.7k
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Comment: C: will different proportion of control/patient samples affect gene's Pearson corre
7.0 years ago by hellocita ▴ 40
2
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3
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1.7k
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will different proportion of control/patient samples affect gene's Pearson correlation?
hierarchical clustering pearson correlation
updated 7.0 years ago by 89k • written 7.0 years ago by ▴ 40
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0
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2.8k
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Comment: C: Why does GO enrichment result give different results when gene list cutoff chang
7.0 years ago by hellocita ▴ 40
1
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0
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2.8k
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Comment: C: Why does GO enrichment result give different results when gene list cutoff chang
7.0 years ago by hellocita ▴ 40
4
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4
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2.8k
views
Why does GO enrichment result give different results when gene list cutoff change?
RNA-Seq gene
updated 7.1 years ago by ★ 1.2k • written 7.1 years ago by ▴ 40
0
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0
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3.5k
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Comment: C: PANTHER and DAVID can't recognized some Ensembl gene ID?
7.2 years ago by hellocita ▴ 40
3
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2
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3.5k
views
PANTHER and DAVID can't recognized some Ensembl gene ID?
gene RNA-Seq
updated 7.2 years ago by ★ 2.6k • written 7.2 years ago by ▴ 40
2
votes
2
replies
1.9k
views
batch effect of repeated experiment
RNA-Seq R gene
updated 7.3 years ago by 20 • written 7.4 years ago by ▴ 40
0
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0
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9.1k
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Answer: A: Gwas - Permutation Testing?
7.8 years ago by hellocita ▴ 40
1
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2
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6.1k
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How to Calculate FDR in permutation F test
R
updated 7.8 years ago by 27k • written 7.8 years ago by ▴ 40
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1
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1.7k
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Comment: C: remove effect of factors in differential analysis
7.8 years ago by hellocita ▴ 40
1
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4
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1.7k
views
remove effect of factors in differential analysis
R
7.8 years ago by hellocita ▴ 40
0
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0
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3.4k
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Comment: C: remove batch effect for multiple tumor data
7.9 years ago by hellocita ▴ 40
1
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4
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3.4k
views
remove batch effect for multiple tumor data
RNA-Seq batch-effect
updated 10 months ago by 44k • written 7.9 years ago by ▴ 40
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0
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3.4k
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Comment: C: remove batch effect for multiple tumor data
7.9 years ago by hellocita ▴ 40
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