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Comment: C: Align RNA-seq data to a custom list of exons?
6.0 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: NCI-60 RNA-seq data
6.1 years ago by Praneet Chaturvedi ▴ 120
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4.8k
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Comment: C: How to treat the pair-end files as single-end when RNA-Seq align?
6.1 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: Find Transcription factor binding site for a gene list
updated 6.1 years ago by 44k • written 6.1 years ago by ▴ 120
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4.8k
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Comment: A: How to treat the pair-end files as single-end when RNA-Seq align?
6.1 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: IGB crashes when loading track or trying to navigate along the genome
6.1 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: Batch effect correction in DE analysis of single cell RNA-seq data and visualiza
6.1 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: macs2 conda installation problem
6.1 years ago by Praneet Chaturvedi ▴ 120
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Tool: Computational Suite for Bioinformaticians and Biologists
Visualization Normalization RNA-Seq ChIP-Seq
updated 17 months ago by 44k • written 6.6 years ago by ▴ 120
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9.8k
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Answer: A: Peaks And Nearby Genes
7.5 years ago by Praneet Chaturvedi ▴ 120
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Tool: Computational Suite For Bioinformaticians and Biologists -- CSBB [Version 2.1]
DownstreamAnalysis R RNA-Seq Perl
updated 17 months ago by 44k • written 7.5 years ago by ▴ 120
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Answer: A: error on installing samtools on linux cluster
7.6 years ago by Praneet Chaturvedi ▴ 120
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Answer: A: MACS2 with multiple replicates
7.6 years ago by Praneet Chaturvedi ▴ 120
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Tool: CSBB-v2.0 [Computational Suite for Bioinformaticians and Biologists version 2]
Differential-Expression R python perl RNA-Seq
updated 17 months ago by 44k • written 7.6 years ago by ▴ 120
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