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Could it be risky to analyse cells that are negative after cell hashing on single cell RNA sequencing?
RNA-Seq singlecell R Seurat
3.6 years ago by charlesgwellem ▴ 10
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1.0k
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Could adaptor contamination and primer dimers lead to low number of cells detected during a single cell RNA sequencing ?
RNA-Seq rna-seq alignment sequencing next-gen
updated 3.7 years ago by 147k • written 3.7 years ago by ▴ 10
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787
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Comment: C: Must an experimentally proven disease-relevant gene appear significantly differe
3.7 years ago by charlesgwellem ▴ 10
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3
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787
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Must an experimentally proven disease-relevant gene appear significantly differentially expressed on RNA sequencing analysis?
RNA-Seq rna-seq R next-gen
3.7 years ago by charlesgwellem ▴ 10
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0
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535
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Why could I be having only NAs for p_val and p_val_adj in Seurat DGE analysis?
RNA-Seq R rna-seq next-gen gene
3.7 years ago by charlesgwellem ▴ 10
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1.7k
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Comment: C: Non-linear relationship between a cell's mitochondrial content and detection of
3.7 years ago by charlesgwellem ▴ 10
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4
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1.7k
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Non-linear relationship between a cell's mitochondrial content and detection of ribosomal genes ssen in single cell rNA seq
RNA-Seq next-gen
updated 3.7 years ago by ▴ 180 • written 3.7 years ago by ▴ 10
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2
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7.9k
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Answer: A: Getting mitochondrial genes for scRNAseq
3.7 years ago by charlesgwellem ▴ 10
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921
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Any programmatic tools apart from image J to quantify microscopic images from histological staining?
Imaging python R
4.6 years ago by charlesgwellem ▴ 10
2
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5
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2.4k
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Can HOMER be used to predict the binding site of a transcription factor on a DNA sequence?
ChIP-Seq RNA-Seq genome gene HOMER
updated 5.5 years ago by 36k • written 5.5 years ago by ▴ 10
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2
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2.4k
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Comment: C: Simple user-friendly tool to find the potential binding site of a particular DN
5.5 years ago by charlesgwellem ▴ 10
6
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4
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1.4k
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Is there a data base, tool or method I can use to find out which of my genes code for cytokine receptors?
gene genome RNA-Seq R
5.8 years ago by charlesgwellem ▴ 10
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0
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1.4k
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Comment: A: Is there a data base, tool or method I can use to find out which of my genes cod
5.8 years ago by charlesgwellem ▴ 10
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1
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5.7k
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Seurat: Percentage distribution of cells in all clusters based on their treatment condition?
R RNA-Seq Seurat single cell
updated 5.8 years ago by 5.8k • written 5.8 years ago by ▴ 10
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0
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902
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Data base or computational tool to help predict if two predicted interacting surface proteins are located on separate cells or on the same cell?
genome RNA-Seq
updated 18 months ago by 44k • written 5.8 years ago by ▴ 10
3
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2
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1.5k
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Given a list of cell surface genes, is there a computational possibility to predict their interaction partners on the surface of another cell?
gene RNA-Seq R Fibroblasts GeneOntology
updated 5.8 years ago by ★ 4.1k • written 5.8 years ago by ▴ 10
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1
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1.7k
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How do I identify which differentially expressed genes are on the cell surface?
sequencing R IPA SurfaceMarkers Python
updated 5.8 years ago by 27k • written 5.8 years ago by ▴ 10
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