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Comment:
C: How to differ color based on rise or fall of values in boxplot ?
6.7 years ago by
Björn
▴ 110
0
votes
1
reply
2.5k
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count based or cpm based filtering for miRNA normalization when library size is small.
edgeR
mirna
cpm
rnaseq
differential expression
6.7 years ago by
Björn
▴ 110
0
votes
1
reply
8.4k
views
Comment:
C: How to differ color based on rise or fall of values in boxplot ?
6.7 years ago by
Björn
▴ 110
0
votes
1
reply
8.4k
views
Comment:
C: How to differ color based on rise or fall of values in boxplot ?
6.7 years ago by
Björn
▴ 110
1
vote
12
replies
8.4k
views
How to differ color based on rise or fall of values in boxplot ?
rstudio
boxplot
ggpaired
ggbarplot
updated 6.7 years ago by
russhh
5.7k • written 6.7 years ago by
Björn
▴ 110
0
votes
1
reply
8.4k
views
Comment:
C: How to differ color based on rise or fall of values in boxplot ?
6.7 years ago by
Björn
▴ 110
0
votes
0
replies
8.4k
views
Comment:
C: How to differ color based on rise or fall of values in boxplot ?
6.7 years ago by
Björn
▴ 110
0
votes
1
reply
1.5k
views
Comment:
C: How to interpret summary(fit$df.prior) ?
6.8 years ago by
Björn
▴ 110
1
vote
3
replies
1.5k
views
How to interpret summary(fit$df.prior) ?
edgeR
mirna
plotQLDisp
6.8 years ago by
Björn
▴ 110
11
votes
4
replies
18k
views
How to name column header for first column ?
r
dplyr
updated 6.8 years ago by
cpad0112
21k • written 6.8 years ago by
Björn
▴ 110
0
votes
0
replies
1.3k
views
Stripchart to show expression of individual miRNA
stripchart
edgeR
mirna
gene expression
Rstudio
6.8 years ago by
Björn
▴ 110
0
votes
1
reply
5.2k
views
Comment:
C: How to interpret result from glmQLFTest in edgeR ?
6.8 years ago by
Björn
▴ 110
0
votes
1
reply
5.2k
views
Comment:
C: How to interpret result from glmQLFTest in edgeR ?
6.8 years ago by
Björn
▴ 110
0
votes
1
reply
5.2k
views
Comment:
C: How to interpret result from glmQLFTest in edgeR ?
6.8 years ago by
Björn
▴ 110
2
votes
7
replies
5.2k
views
How to interpret result from glmQLFTest in edgeR ?
edgeR
edgeRUsersGuide
DE genes
6.8 years ago by
Björn
▴ 110
1
vote
0
replies
20k
views
Comment:
C: How to cluster in heatmap.2
6.8 years ago by
Björn
▴ 110
10
votes
2
replies
20k
views
How to cluster in heatmap.2
heatmap.2
edgeR
Manhattan
euclidean
updated 6.8 years ago by
Kevin Blighe
88k • written 6.8 years ago by
Björn
▴ 110
4
votes
7
replies
11k
views
How to regroup columns in R using heatmap.2 or pheatmap ?
edgeR
heatmap.2
pheatmap
updated 6.8 years ago by
h.mon
35k • written 6.8 years ago by
Björn
▴ 110
0
votes
1
reply
11k
views
Comment:
C: How to regroup columns in R using heatmap.2 or pheatmap ?
6.8 years ago by
Björn
▴ 110
0
votes
1
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11k
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Comment:
C: How to regroup columns in R using heatmap.2 or pheatmap ?
6.8 years ago by
Björn
▴ 110
0
votes
0
replies
6.5k
views
Comment:
C: How to interpret heatmap ?
6.8 years ago by
Björn
▴ 110
6
votes
11
replies
6.5k
views
How to interpret heatmap ?
pheatmap
lcpm
edgeR
updated 6.8 years ago by
Nicolas Rosewick
11k • written 6.8 years ago by
Björn
▴ 110
0
votes
2
replies
2.6k
views
Different results with heatmap.2 and pheatmap ?
edgeR
pheatmap
heatmap.2
6.8 years ago by
Björn
▴ 110
0
votes
0
replies
6.5k
views
Comment:
A: How to interpret heatmap ?
6.8 years ago by
Björn
▴ 110
0
votes
1
reply
6.5k
views
Comment:
C: How to interpret heatmap ?
6.8 years ago by
Björn
▴ 110
2
votes
8
replies
3.4k
views
boxplot in edgeR
edgeR
boxplot
lcpm
updated 6.8 years ago by
theobroma22
★ 1.2k • written 6.9 years ago by
Björn
▴ 110
0
votes
1
reply
3.4k
views
Comment:
A: boxplot in edgeR
6.9 years ago by
Björn
▴ 110
0
votes
5
replies
3.8k
views
Error in design.matrix in edgeR?
RNA-Seq
edgeR
mirnaseq
R
updated 6.9 years ago by
Devon Ryan
105k • written 6.9 years ago by
Björn
▴ 110
0
votes
1
reply
3.8k
views
Comment:
C: Error in design.matrix in edgeR?
6.9 years ago by
Björn
▴ 110
2
votes
1
reply
1.7k
views
venndiagram select dt
edger
venndiagram
updated 6.9 years ago by
Friederike
9.0k • written 7.1 years ago by
Björn
▴ 110
0
votes
0
replies
4.6k
views
Comment:
C: How to create design matrix in edgeR
6.9 years ago by
Björn
▴ 110
0
votes
3
replies
4.6k
views
How to create design matrix in edgeR
RNA-Seq
edgeR
design.matrix
R
bioconductor
updated 6.9 years ago by
Devon Ryan
105k • written 6.9 years ago by
Björn
▴ 110
4
votes
9
replies
5.2k
views
6 follow
extract subset of sequence
RNA-Seq
fastq
updated 7.4 years ago by
Matt Shirley
10k • written 7.4 years ago by
Björn
▴ 110
0
votes
1
reply
11k
views
Comment:
C: mirdeep2 step-by-step tutorial
7.4 years ago by
Björn
▴ 110
0
votes
1
reply
3.0k
views
Comment:
C: align spike in database
7.4 years ago by
Björn
▴ 110
0
votes
0
replies
12k
views
Comment:
C: Microrna Pipeline
7.4 years ago by
Björn
▴ 110
0
votes
1
reply
3.0k
views
Comment:
C: align spike in database
7.4 years ago by
Björn
▴ 110
0
votes
6
replies
3.0k
views
align spike in database
RNA-Seq
Spike-in
Bowtie2
fastqc
updated 7.4 years ago by
swbarnes2
14k • written 7.4 years ago by
Björn
▴ 110
0
votes
1
reply
2.7k
views
rnaseq sequence analysis and trimming
rna-seq
RNA-Seq
fastqc
trimmomatic
cutadapt
updated 7.7 years ago by
WouterDeCoster
47k • written 7.7 years ago by
Björn
▴ 110
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