Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
42
votes
13
replies
29k
views
13 follow
Gene Set Enrichment Analysis after DESeq2
RNA-Seq DESeq2 geneontology GSEA
updated 8 months ago by ▴ 120 • written 7.1 years ago by ▴ 300
9
votes
10
replies
8.1k
views
7 follow
Featurecounts to DESEq2 - How to merge biological replicates?
DESeq2 RNA-Seq featurecounts
updated 2.1 years ago by ★ 4.3k • written 7.5 years ago by ▴ 300
8
votes
6
replies
9.1k
views
6 follow
Generating heatmaps of pre-selected candidate genes after deseq2
RNA-Seq DESEq2 heatmap
updated 3.1 years ago by • 0 • written 7.1 years ago by ▴ 300
2
votes
5
replies
6.1k
views
Validation of RNASeq Data - How to validate RNASeq DEGs using qPCR
RNA-Seq DESeq2
updated 4.1 years ago by ★ 5.2k • written 7.2 years ago by ▴ 300
0
votes
2
replies
1.4k
views
Classifying DEGs based on the tissue where it is expressed
gene ontology deseq2 RNA-Seq
updated 5.6 years ago by 20 • written 7.1 years ago by ▴ 300
12
votes
2
replies
7.9k
views
GO analysis using topGO Arabidopsis
RNA-Seq geneontology GOenrichment topGO
updated 5.7 years ago by 88k • written 7.6 years ago by ▴ 300
11
votes
9
replies
9.3k
views
7 follow
Getting average fragment length for single end reads
RNA-Seq kallisto differential expresion
updated 6.5 years ago by ▴ 30 • written 7.5 years ago by ▴ 300
2
votes
5
replies
3.3k
views
Time course experiment in RNASeq
RNA-Seq
updated 7.0 years ago by 7.6k • written 7.1 years ago by ▴ 300
0
votes
0
replies
1.1k
views
Plotting Results in EBSeq-HMM
RNA-Seq EBSeq-HMM
7.0 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
1.3k
views
Kallisto counts to Bayseq
RNA-Seq
updated 7.0 years ago by 88k • written 7.0 years ago by ▴ 300
1
vote
1
reply
1.2k
views
Bayesian Estimation of Temporal Regulation-RNASeq
RNA-Seq
updated 7.1 years ago by 6.6k • written 7.1 years ago by ▴ 300
0
votes
1
reply
3.1k
views
Comment: C: Fetching NCBI gene symbols from NCBI protein ids or GI identifiers
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
3.3k
views
Comment: C: Time course experiment in RNASeq
7.1 years ago by Sreeraj Thamban ▴ 300
4
votes
8
replies
3.0k
views
6 follow
Best tools for Visualing RNASeq data
RNA-Seq DESEQ2
updated 7.1 years ago by ▴ 990 • written 7.1 years ago by ▴ 300
0
votes
3
replies
3.0k
views
Comment: C: Best tools for Visualing RNASeq data
7.1 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
1.7k
views
Answer: A: How I can produce graphs like this
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
4.1k
views
Comment: C: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Sreeraj Thamban ▴ 300
2
votes
1
reply
4.4k
views
Answer: A: Python for bioinformatics
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
4.1k
views
Comment: C: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
2
replies
4.1k
views
Comment: C: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Sreeraj Thamban ▴ 300
6
votes
9
replies
4.1k
views
Paired end vs Single end Differential gene expression analysis
RNA-Seq DESEq2
updated 7.1 years ago by 5.2k • written 7.1 years ago by ▴ 300
1
vote
0
replies
29k
views
Answer: A: Can anyone suggest a good tutorial to learn RNA-seq analysis?
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
1.2k
views
Comment: C: Getting the number of Genes expressed in a sample
7.1 years ago by Sreeraj Thamban ▴ 300
2
votes
4
replies
1.2k
views
Getting the number of Genes expressed in a sample
RNA-Seq
7.1 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
14k
views
Comment: C: Dealing with multimapping reads in featureCounts
7.2 years ago by Sreeraj Thamban ▴ 300
7
votes
4
replies
14k
views
Dealing with multimapping reads in featureCounts
RNA-Seq featureCounts TopHat
updated 23 months ago by • 0 • written 7.2 years ago by ▴ 300
0
votes
1
reply
4.5k
views
Comment: C: Selecting Deferentially Expressed Genes in RNASeq data analysis - DESEq2 and Cuf
7.2 years ago by Sreeraj Thamban ▴ 300
0
votes
0
replies
4.5k
views
Comment: C: Selecting Deferentially Expressed Genes in RNASeq data analysis - DESEq2 and Cuf
7.2 years ago by Sreeraj Thamban ▴ 300
9
votes
12
replies
4.5k
views
Selecting Deferentially Expressed Genes in RNASeq data analysis - DESEq2 and Cuffdiff
RNA-Seq DESeq2
updated 7.2 years ago by 88k • written 7.2 years ago by ▴ 300
0
votes
1
reply
6.1k
views
Comment: C: Validation of RNASeq Data - How to validate RNASeq DEGs using qPCR
7.2 years ago by Sreeraj Thamban ▴ 300
0
votes
0
replies
1.2k
views
Retrieving Annotation data from runTest() created object
rna-seq topGO Deseq2 gene ontology
7.4 years ago by Sreeraj Thamban ▴ 300
0
votes
0
replies
2.5k
views
Answer: A: Gene set enrichment analysis cuffdiff output
7.5 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
9.3k
views
Comment: C: Getting average fragment length for single end reads
7.5 years ago by Sreeraj Thamban ▴ 300
0
votes
0
replies
9.3k
views
Comment: C: Getting average fragment length for single end reads
7.5 years ago by Sreeraj Thamban ▴ 300
3
votes
4
replies
5.2k
views
Retrieving the gene list related to all GO ID
topgo gene ontology RNA-Seq R
updated 7.5 years ago by ★ 1.1k • written 7.5 years ago by ▴ 300
0
votes
0
replies
5.2k
views
Comment: C: Retrieving the gene list related to all GO ID
7.5 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
4.0k
views
Comment: C: Deseq2 differential result
7.5 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
4.0k
views
Answer: A: Deseq2 differential result
7.5 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
8.1k
views
Comment: C: Featurecounts to DESEq2 - How to merge biological replicates?
7.5 years ago by Sreeraj Thamban ▴ 300
0
votes
1
reply
8.1k
views
Comment: C: Featurecounts to DESEq2 - How to merge biological replicates?
7.5 years ago by Sreeraj Thamban ▴ 300
1
vote
0
replies
3.7k
views
Answer: A: Help for finding the right FASTA file for kallisto
7.6 years ago by Sreeraj Thamban ▴ 300
1
vote
1
reply
4.0k
views
Using Plant GO Slim in topGO
topGO Gene ontology plant GO slim arabidopsis
7.6 years ago by Sreeraj Thamban ▴ 300
2
votes
0
replies
7.9k
views
Comment: C: GO analysis using topGO Arabidopsis
7.6 years ago by Sreeraj Thamban ▴ 300
43 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6