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25
votes
4
replies
43k
views
bcftools compressing and indexing vcf files
sequence
bcftools
vcf
index
updated 12 months ago by
GenoMax
147k • written 6.2 years ago by
Inquisitive8995
▴ 280
1
vote
0
replies
15k
views
Comment:
Comment: snpEff building new database ERROR
2.7 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
15k
views
Comment:
Comment: snpEff building new database ERROR
2.7 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
496
views
Comparison between two files with chromosomes and positions
AWK
updated 20 months ago by
Ram
44k • written 2.8 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.3k
views
Comment:
Comment: Exclude specified range of bases from multiple sequences in a FASTA file
3.1 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
1.3k
views
Comment:
Comment: Exclude specified range of bases from multiple sequences in a FASTA file
3.1 years ago by
Inquisitive8995
▴ 280
1
vote
3
replies
1.3k
views
Exclude specified range of bases from multiple sequences in a FASTA file
FASTA
Assembly
updated 20 months ago by
Ram
44k • written 3.1 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.6k
views
Comment:
Comment: Removing specified range of bases from middle of the contigs and creating new se
3.3 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
1.6k
views
Comment:
Comment: Removing specified range of bases from middle of the contigs and creating new se
3.3 years ago by
Inquisitive8995
▴ 280
0
votes
2
replies
1.6k
views
Comment:
Comment: Removing specified range of bases from middle of the contigs and creating new se
3.3 years ago by
Inquisitive8995
▴ 280
0
votes
5
replies
1.6k
views
Removing specified range of bases from middle of the contigs and creating new sequences
Contigs
Assembly
fastafile
updated 3.3 years ago by
cpad0112
21k • written 3.3 years ago by
Inquisitive8995
▴ 280
12
votes
8
replies
17k
views
Genome assembly N50
Assembly
assembly tools
N50
updated 3.5 years ago by
lieven.sterck
15k • written 6.5 years ago by
Inquisitive8995
▴ 280
8
votes
3
replies
3.1k
views
Create duplicate columns in R for a large data frame
R
dataframe
updated 3.6 years ago by
cpad0112
21k • written 3.6 years ago by
Inquisitive8995
▴ 280
1
vote
0
replies
3.1k
views
Comment:
Comment: Create duplicate columns in R for a large data frame
3.6 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
2.2k
views
Comment:
Comment: GAPIT error : invalid '(to - from)/by'
3.6 years ago by
Inquisitive8995
▴ 280
0
votes
2
replies
2.2k
views
GAPIT error : invalid '(to - from)/by'
GWAS
R
programming
3.6 years ago by
Inquisitive8995
▴ 280
1
vote
0
replies
4.1k
views
Comment:
C: VCF tools --freq output file
4.4 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
4.1k
views
Comment:
C: VCF tools --freq output file
4.4 years ago by
Inquisitive8995
▴ 280
2
votes
4
replies
4.1k
views
VCF tools --freq output file
allele-frequency
VCFtools
updated 20 months ago by
Ram
44k • written 4.4 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
5.1k
views
Comment:
C: Minimap2 giving 2 TB sam file as an output
5.0 years ago by
Inquisitive8995
▴ 280
3
votes
7
replies
5.1k
views
Minimap2 giving 2 TB sam file as an output
sequence
minimap2
alignment
updated 5.0 years ago by
h.mon
35k • written 5.0 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
5.1k
views
Comment:
C: Minimap2 giving 2 TB sam file as an output
5.0 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
5.1k
views
Comment:
C: Minimap2 giving 2 TB sam file as an output
5.0 years ago by
Inquisitive8995
▴ 280
3
votes
1
reply
3.3k
views
Comment:
C: what do the bcftools ROH output "markers & quality" fields indicate ?
5.3 years ago by
Inquisitive8995
▴ 280
4
votes
3
replies
3.3k
views
what do the bcftools ROH output "markers & quality" fields indicate ?
sequencing
ROH
updated 2.7 years ago by
taniamahmood38
▴ 60 • written 5.3 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
2.7k
views
Comment:
C: How to find pattern matching over range of columns but not present in other colu
5.4 years ago by
Inquisitive8995
▴ 280
12
votes
6
replies
2.7k
views
How to find pattern matching over range of columns but not present in other columns?
snp
R
shell
updated 5.4 years ago by
AK
★ 2.2k • written 5.4 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
2.7k
views
Comment:
C: How to find pattern matching over range of columns but not present in other colu
5.4 years ago by
Inquisitive8995
▴ 280
1
vote
1
reply
1.4k
views
Answer:
C: Help in Gwas analysis
5.5 years ago by
Inquisitive8995
▴ 280
4
votes
6
replies
7.6k
views
Create a plot based on binary input of 1s and 0s.
R
script
plot
updated 5.6 years ago by
zx8754
12k • written 5.6 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
7.6k
views
Comment:
C: Create coloured plot based on 1s and 0s
5.6 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
7.6k
views
Comment:
C: Create coloured plot based on 1s and 0s
5.6 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
7.6k
views
Comment:
C: Create coloured plot based on 1s and 0s
5.6 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
2.2k
views
Comment:
C: Bedtools intersect error
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
2.2k
views
Comment:
C: Bedtools intersect error
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
4
replies
2.2k
views
Bedtools intersect error
software error
sequence
vcf
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.8k
views
Comment:
C: PLINK error message
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.2k
views
Comment:
C: Augustus Genome annotation
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
1.2k
views
Comment:
C: Augustus Genome annotation
5.7 years ago by
Inquisitive8995
▴ 280
2
votes
5
replies
1.2k
views
Augustus Genome annotation
genome
annotation
updated 5.7 years ago by
lieven.sterck
15k • written 5.7 years ago by
Inquisitive8995
▴ 280
11
votes
18
replies
3.8k
views
6 follow
How to extract filename and change text in the same file
sequence
VCF
Script
updated 5.7 years ago by
Malcolm.Cook
★ 1.5k • written 5.7 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
3.8k
views
Comment:
C: How to extract filename and change text in the same file
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
3.8k
views
Comment:
C: How to extract filename and change text in the same file
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
3.8k
views
Comment:
C: How to extract filename and change text in the same file
5.7 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.6k
views
Comment:
C: Creation of separate sample sheet for demultiplexing
5.8 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.6k
views
Comment:
C: Creation of separate sample sheet for demultiplexing
5.8 years ago by
Inquisitive8995
▴ 280
0
votes
1
reply
1.6k
views
Comment:
C: Creation of separate sample sheet for demultiplexing
5.8 years ago by
Inquisitive8995
▴ 280
0
votes
0
replies
1.6k
views
Comment:
C: Creation of separate sample sheet for demultiplexing
5.8 years ago by
Inquisitive8995
▴ 280
1
vote
10
replies
1.6k
views
Creation of separate sample sheet for demultiplexing
sequencing
samplesheet
alignment
5.8 years ago by
Inquisitive8995
▴ 280
4
votes
1
reply
2.2k
views
Common reads between two fastq files
exome
sequence
Assembly
updated 8 months ago by
Ram
44k • written 5.9 years ago by
Inquisitive8995
▴ 280
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