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4.2k
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Giving options to Command line Clustalw
clustalw unix
updated 5.9 years ago by ▴ 20 • written 7.3 years ago by ▴ 10
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4
replies
1.7k
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Is there a program that can predict or accurately guess tumour stage from information like tumour size, type, presence of lymph node metastasis etc
cancer tumour stage machine learning
updated 7.1 years ago by 20 • written 7.5 years ago by ▴ 10
2
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1
reply
1.2k
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Obtaining generation times of mammals and reptiles
generation time lifespan
7.3 years ago by Jacob ▴ 10
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0
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4.2k
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Answer: A: Giving options to Command line Clustalw
7.3 years ago by Jacob ▴ 10
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0
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1.4k
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tblastx returning hits with 33% query cover for human genes against the human genome
blast tblastx query cover
7.3 years ago by Jacob ▴ 10
3
votes
1
reply
2.6k
views
Using needle command with no output to the terminal
needle emboss silent
updated 7.3 years ago by ★ 2.9k • written 7.3 years ago by ▴ 10
0
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0
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1.7k
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Comment: C: Is there a program that can predict or accurately guess tumour stage from inform
7.4 years ago by Jacob ▴ 10
0
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1
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1.7k
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Comment: C: Is there a program that can predict or accurately guess tumour stage from inform
7.5 years ago by Jacob ▴ 10
0
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0
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1.6k
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What do the blast parameters template_type, template_length, best_hit_overhang, and best_hit_score_edge do
blast discontiguous-megablast
7.5 years ago by Jacob ▴ 10
0
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0
replies
1.3k
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Receiving low query covers for blast searches on genome files, but not transcript files
blast genome transcript rna-seq
7.5 years ago by Jacob ▴ 10
0
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1
reply
2.3k
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Comment: C: Meaning behind the path organization in NCBI ftp site
7.5 years ago by Jacob ▴ 10
1
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4
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2.3k
views
Meaning behind the path organization in NCBI ftp site
NCBI genome ftp
updated 7.5 years ago by 104k • written 7.5 years ago by ▴ 10
2
votes
1
reply
3.5k
views
Printing features of a specific type only from a Genbank file with Biopython
SeqIO Seq genbank biopython
updated 7.5 years ago by 11k • written 7.5 years ago by ▴ 10
0
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0
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3.2k
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Comment: C: Using efetch(biopython) to get the fasta file of an mRNA, as well as the exon lo
7.5 years ago by Jacob ▴ 10
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2
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3.2k
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Using efetch(biopython) to get the fasta file of an mRNA, as well as the exon locations
biopython python efetch entrez
updated 7.5 years ago by ▴ 60 • written 7.5 years ago by ▴ 10
0
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0
replies
2.4k
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What is the difference between qcovs, qcovhsp, qcovus in blast
blast qcov
7.5 years ago by Jacob ▴ 10
0
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1
reply
1.7k
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Comment: C: Which files in the NCBI Genomes ftp site are the most reliable
7.5 years ago by Jacob ▴ 10
0
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1
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1.7k
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Comment: C: Which files in the NCBI Genomes ftp site are the most reliable
7.5 years ago by Jacob ▴ 10
3
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5
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1.7k
views
Which files in the NCBI Genomes ftp site are the most reliable
genome sequence ncbi blast
7.5 years ago by Jacob ▴ 10
0
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1
reply
3.0k
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Comment: C: Receiving an error when using blastn remotely within a loop. "service not found"
7.5 years ago by Jacob ▴ 10
0
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1
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3.0k
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Comment: C: Receiving an error when using blastn remotely within a loop. "service not found"
7.5 years ago by Jacob ▴ 10
3
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6
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3.0k
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Receiving an error when using blastn remotely within a loop. "service not found" "null_connector" "Cannot read header" "Unable to read data" and "Fai…
blast blast+ blastn
updated 7.5 years ago by 147k • written 7.5 years ago by ▴ 10
0
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0
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3.6k
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Comment: C: How to download just the genomes I want for blast+: currently using update_blast
7.5 years ago by Jacob ▴ 10
0
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2
replies
3.6k
views
Comment: C: How to download just the genomes I want for blast+: currently using update_blast
7.5 years ago by Jacob ▴ 10
0
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1
reply
3.6k
views
Comment: C: How to download just the genomes I want for blast+: currently using update_blast
7.5 years ago by Jacob ▴ 10
4
votes
7
replies
3.6k
views
How to download just the genomes I want for blast+: currently using update_blastdb.pl
blastn update_blastdb.pl refseq_genomic ftp
7.5 years ago by Jacob ▴ 10
0
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0
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2.2k
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Comment: C: which database to blast against genomes.
7.5 years ago by Jacob ▴ 10
0
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0
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2.2k
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Comment: C: which database to blast against genomes.
7.5 years ago by Jacob ▴ 10
0
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1
reply
2.2k
views
Comment: C: which database to blast against genomes.
7.5 years ago by Jacob ▴ 10
1
vote
7
replies
2.2k
views
which database to blast against genomes.
refseq_genomic nt blast blastn blast+
updated 7.5 years ago by 35k • written 7.5 years ago by ▴ 10
1
vote
1
reply
1.6k
views
Blastn stopped finishing commands it previously finished
blast blastn screen nohup command-line
7.6 years ago by Jacob ▴ 10
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