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3
votes
4
replies
1.8k
views
How to get regions with mapped reads
bed
bam
RNA-Seq
bedtools
updated 20 months ago by
Ram
44k • written 6.1 years ago by
nanoide
▴ 120
0
votes
0
replies
1.9k
views
Comment:
C: Ovation RNA-seq system, bionfomatic alignment and htseq-count
6.1 years ago by
nanoide
▴ 120
0
votes
2
replies
1.9k
views
Comment:
C: Ovation RNA-seq system, bionfomatic alignment and htseq-count
6.1 years ago by
nanoide
▴ 120
5
votes
5
replies
1.9k
views
Ovation RNA-seq system, bionfomatic alignment and htseq-count
RNA-Seq
hisat2
htseq-count
updated 6.1 years ago by
caggtaagtat
★ 1.9k • written 6.1 years ago by
nanoide
▴ 120
0
votes
1
reply
5.3k
views
Comment:
C: Can I convert normalized counts from DESEQ2 into fpkm?
6.3 years ago by
nanoide
▴ 120
0
votes
1
reply
5.3k
views
Comment:
C: Can I convert normalized counts from DESEQ2 into fpkm?
6.3 years ago by
nanoide
▴ 120
8
votes
8
replies
5.3k
views
Can I convert normalized counts from DESEQ2 into fpkm?
RNA-Seq
deseq
normalization
fpkm
6.3 years ago by
nanoide
▴ 120
0
votes
0
replies
3.4k
views
Comment:
A: Remove secondary alignments in RNA-seq analysis?
6.4 years ago by
nanoide
▴ 120
5
votes
4
replies
3.4k
views
Remove secondary alignments in RNA-seq analysis?
RNA-seq
HISAT2
alignment
6.4 years ago by
nanoide
▴ 120
0
votes
1
reply
3.8k
views
Comment:
C: Doubt using HOMER annotatePeaks.pl
6.4 years ago by
nanoide
▴ 120
0
votes
3
replies
3.8k
views
Doubt using HOMER annotatePeaks.pl
ChIP-Seq
HOMER
MACS2
updated 2.8 years ago by
bencom
• 0 • written 6.4 years ago by
nanoide
▴ 120
0
votes
0
replies
7.5k
views
Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
6.4 years ago by
nanoide
▴ 120
0
votes
1
reply
7.5k
views
Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
6.5 years ago by
nanoide
▴ 120
0
votes
0
replies
7.5k
views
Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
6.5 years ago by
nanoide
▴ 120
4
votes
6
replies
7.5k
views
ATAC-seq macs2 peak calling bampe mode extension shift
ATAC-seq
ChIP-Seq
macs
peaks
updated 6.5 years ago by
Ricardo A.
▴ 90 • written 6.5 years ago by
nanoide
▴ 120
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