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Answer: A: How to show an attribute next to the label in Cytoscape
5.1 years ago by Wietje ▴ 240
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Ensembl Biomart overlap QTL regions and genes
ensembl biomart genome
updated 5.5 years ago by 24k • written 5.6 years ago by ▴ 240
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Answer: A: Sort the 'score' value for each aligned sequence
updated 5.9 years ago by 12k • written 6.7 years ago by ▴ 240
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Comment: C: Co-expression network using Cytoscape
6.1 years ago by Wietje ▴ 240
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4.5k
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Comment: C: Co-expression network using Cytoscape
6.1 years ago by Wietje ▴ 240
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Comment: C: RNA-seq mapping rate
6.1 years ago by Wietje ▴ 240
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Answer: A: Co-expression network using Cytoscape
6.1 years ago by Wietje ▴ 240
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Answer: A: Runs of homozygosity calculation
6.6 years ago by Wietje ▴ 240
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Answer: A: Decreased base quality at start of RNA seq reads
6.6 years ago by Wietje ▴ 240
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Answer: A: How to convert PLINK file (map, ped) to haplotype file for XPEHH application
6.6 years ago by Wietje ▴ 240
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Comment: C: Read MAP and PED files in PLINK
6.6 years ago by Wietje ▴ 240
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8.2k
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Comment: Comment: Read MAP and PED files in PLINK
6.6 years ago by Wietje ▴ 240
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Answer: A: How to create heatmaps only with DE genes in edgeR
6.6 years ago by Wietje ▴ 240
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3.4k
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Answer: A: Calculate the genotype frequency
6.7 years ago by Wietje ▴ 240
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2.7k
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Comment: C: FeatureCounts fails to count fragments instead of reads
6.7 years ago by Wietje ▴ 240
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Comment: C: FeatureCounts fails to count fragments instead of reads
6.7 years ago by Wietje ▴ 240
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2.7k
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Comment: C: FeatureCounts fails to count fragments instead of reads
6.7 years ago by Wietje ▴ 240
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2.7k
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FeatureCounts fails to count fragments instead of reads
RNA-Seq FeatureCounts Fragment Counting reads
updated 6.7 years ago by ▴ 710 • written 6.7 years ago by ▴ 240
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Answer: A: How to extract genes 10000 bp upstream and 1000 bp downstream of long non coding
6.8 years ago by Wietje ▴ 240
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4.3k
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Answer: A: fcGENE conversion error: Plink dosage to bed/bim/fam
6.8 years ago by Wietje ▴ 240
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Answer: A: Tools to assess coverage and error rate at specific position
6.8 years ago by Wietje ▴ 240
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Answer: A: Removing SNPs with over 2% missing rate in plink
6.8 years ago by Wietje ▴ 240
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4.2k
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Comment: C: Phasing without a reference panel
6.8 years ago by Wietje ▴ 240
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4.2k
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Comment: C: Phasing without a reference panel
6.9 years ago by Wietje ▴ 240
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4.2k
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Answer: A: Phasing without a reference panel
6.9 years ago by Wietje ▴ 240
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1
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1.3k
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Answer: A: when a contig is called "orphan"?
6.9 years ago by Wietje ▴ 240
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Comment: C: vcftools/ plink conserve phase information
6.9 years ago by Wietje ▴ 240
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vcftools/ plink conserve phase information
vcftools phase information haplotype plink
updated 6.9 years ago by 11k • written 6.9 years ago by ▴ 240
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2.5k
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Answer: A: Plink. Convert ped files of artificially mixed population into vcf using recode
7.0 years ago by Wietje ▴ 240
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1
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3.5k
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Answer: A: From Impute2 to PLINK: when to merge chromosome files?
7.0 years ago by Wietje ▴ 240
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3.1k
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Comment: C: imputation and changing genotypes in Beagle and FImpute
7.0 years ago by Wietje ▴ 240
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3.1k
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imputation and changing genotypes in Beagle and FImpute
Beagle 4.0 FImpute imputation genotypes
updated 7.0 years ago by ▴ 310 • written 7.0 years ago by ▴ 240
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2.1k
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Beagle 4.0 Imputation - Warning: Skipping VCF record with no data
Beagle 4.0 Imputation VCF-file
updated 7.1 years ago by 164k • written 7.1 years ago by ▴ 240
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8.1k
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Comment: A: Making UpSetR plot with title
7.1 years ago by Wietje ▴ 240
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4.7k
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Comment: C: ERROR: Duplicate row.names not allowed
7.1 years ago by Wietje ▴ 240
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4.7k
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Answer: A: ERROR: Duplicate row.names not allowed
7.1 years ago by Wietje ▴ 240
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3.2k
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Comment: C: PLINK 1.9 mendel errors trios
7.2 years ago by Wietje ▴ 240
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3.2k
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PLINK 1.9 mendel errors trios
plink mendelian error
updated 7.2 years ago by 11k • written 7.2 years ago by ▴ 240
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4.1k
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Answer: C: Bedtools intersect QTL animalgenome
7.4 years ago by Wietje ▴ 240
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Answer: A: Bedtools intersect QTL animalgenome
7.4 years ago by Wietje ▴ 240
2
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4
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4.1k
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Bedtools intersect QTL animalgenome
RNA-Seq
7.4 years ago by Wietje ▴ 240
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