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0
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2
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1.6k
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cufflinks missing some annotations?
RNA-Seq transcripts GTF
6.6 years ago by Sharon ▴ 610
0
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0
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1.9k
views
Comment: C: Builiding reference for annovar based on build37.1?
6.6 years ago by Sharon ▴ 610
0
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5
replies
1.9k
views
Builiding reference for annovar based on build37.1?
Annovar build37.1
updated 6.6 years ago by 13k • written 6.6 years ago by ▴ 610
0
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1
reply
1.9k
views
Comment: C: Builiding reference for annovar based on build37.1?
6.6 years ago by Sharon ▴ 610
3
votes
16
replies
3.2k
views
Base Recabiliration Filters out 88% of the reads
RNA-Seq Variant Calling
updated 6.6 years ago by 20 • written 6.8 years ago by ▴ 610
1
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0
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2.8k
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Comment: C: problem plotting heatmap for pathways?
6.6 years ago by Sharon ▴ 610
1
vote
1
reply
2.8k
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Comment: C: problem plotting heatmap for pathways?
6.6 years ago by Sharon ▴ 610
0
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1
reply
2.8k
views
Comment: C: problem plotting heatmap for pathways?
6.7 years ago by Sharon ▴ 610
2
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7
replies
2.8k
views
problem plotting heatmap for pathways?
RNA-Seq Pathways Heatmap
6.7 years ago by Sharon ▴ 610
0
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1
reply
2.8k
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Comment: C: problem plotting heatmap for pathways?
6.7 years ago by Sharon ▴ 610
3
votes
5
replies
1.5k
views
Should we discard a variant if it pass many filters and fails one?
Variant calling
updated 6.7 years ago by 20 • written 6.7 years ago by ▴ 610
0
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0
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2.8k
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Comment: C: How to fix mismatch between snp file and reference?
6.7 years ago by Sharon ▴ 610
1
vote
0
replies
1.5k
views
Comment: C: Should we discard a variant if it pass many filters and fails one?
6.7 years ago by Sharon ▴ 610
0
votes
0
replies
1.5k
views
Comment: C: Should we discard a variant if it pass many filters and fails one?
6.7 years ago by Sharon ▴ 610
3
votes
8
replies
2.8k
views
How to fix mismatch between snp file and reference?
RNA-Seq
updated 6.7 years ago by ▴ 10 • written 6.7 years ago by ▴ 610
0
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0
replies
2.8k
views
Comment: C: How to fix mismatch between snp file and reference?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: How to fix mismatch between snp file and reference?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: How to fix mismatch between snp file and reference?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
1.2k
views
Comment: C: Why FS is low when reads aligned from strand seem biased?
6.7 years ago by Sharon ▴ 610
2
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3
replies
1.2k
views
Why FS is low when reads aligned from strand seem biased?
Exome Variant Calling VCF
updated 6.7 years ago by 16k • written 6.7 years ago by ▴ 610
0
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0
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1.0k
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Is checking a variant in dbDNV enough to assure it is not in a duplicated gene?
Exome data VCF Variant Call
6.7 years ago by Sharon ▴ 610
1
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0
replies
1.4k
views
Comment: C: Is is a possible mosaic / effect of downsampling?
6.7 years ago by Sharon ▴ 610
0
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1
reply
1.4k
views
Comment: C: Is is a possible mosaic / effect of downsampling?
6.7 years ago by Sharon ▴ 610
3
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4
replies
1.4k
views
Is is a possible mosaic / effect of downsampling?
exome sequencing VCF Downsampling
6.7 years ago by Sharon ▴ 610
0
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1
reply
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
1
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0
replies
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
0
votes
1
reply
2.8k
views
Comment: C: Is this variant probably an artifact?
6.7 years ago by Sharon ▴ 610
7
votes
12
replies
2.8k
views
Is this variant probably an artifact?
VCF Exome Sequencing
6.7 years ago by Sharon ▴ 610
0
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0
replies
2.0k
views
Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
0
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0
replies
2.0k
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Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
0
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2
replies
2.0k
views
Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
5
votes
13
replies
2.0k
views
High Duplication and low coverage RNASeq?
RNA-Seq Duplication Reads Low Coverage
updated 6.8 years ago by 104k • written 6.8 years ago by ▴ 610
0
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0
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2.0k
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Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
0
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1
reply
2.0k
views
Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
0
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1
reply
2.0k
views
Comment: C: High Duplication and low coverage RNASeq?
6.8 years ago by Sharon ▴ 610
0
votes
0
replies
2.5k
views
Filtering using TLOD score in MuTect2?
RNA-Seq Somatic-Mutation Variant-Calling
updated 8 months ago by 44k • written 6.8 years ago by ▴ 610
0
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1
reply
1.7k
views
Comment: C: Too many intronic variants in RNASeq, is this ok?
6.8 years ago by Sharon ▴ 610
0
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0
replies
1.7k
views
Comment: C: Too many intronic variants in RNASeq, is this ok?
6.8 years ago by Sharon ▴ 610
0
votes
6
replies
1.7k
views
Too many intronic variants in RNASeq, is this ok?
RNA-Seq Somatic mutations
6.8 years ago by Sharon ▴ 610
0
votes
1
reply
2.4k
views
Comment: C: MuTect2 still discard many reads, how to fix?
6.8 years ago by Sharon ▴ 610
4
votes
3
replies
2.4k
views
MuTect2 still discard many reads, how to fix?
RNA-Seq Variant Calling
updated 6.8 years ago by 15k • written 6.8 years ago by ▴ 610
0
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0
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3.2k
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Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
0
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0
replies
3.2k
views
Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
0
votes
0
replies
3.2k
views
Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
0
votes
1
reply
3.2k
views
Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
0
votes
1
reply
3.2k
views
Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
0
votes
1
reply
3.2k
views
Comment: C: Base Recabiliration Filters out 88% of the reads
6.8 years ago by Sharon ▴ 610
225 results • Page 2 of 5
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