Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
440
views
Comment: Comment: How to extract and analyze variant sequences from gnomAD v4 exome VCF
11 weeks ago by GouthamAtla 12k
1
vote
1
reply
4.1k
views
Comment: Comment: Prepare for a job interview in bioinformatics
2.6 years ago by GouthamAtla 12k
0
votes
0
replies
1.4k
views
Comment: Comment: Regarding data sharing to reviewers
2.6 years ago by GouthamAtla 12k
1
vote
0
replies
1.4k
views
Comment: C: Tools to Study Intronic Regions from RNA-Seq Data
4.2 years ago by GouthamAtla 12k
2
votes
1
reply
1.4k
views
Answer: A: Tools to Study Intronic Regions from RNA-Seq Data
4.2 years ago by GouthamAtla 12k
0
votes
0
replies
7.0k
views
Answer: A: Sequence extraction from PFAM db with accession ID
updated 4.3 years ago by 45k • written 10.1 years ago by 12k
2
votes
1
reply
14k
views
Answer: A: covert STOCKHOLM alignment to FASTA alignment
updated 4.3 years ago by 45k • written 10.1 years ago by 12k
0
votes
0
replies
1.8k
views
Comment: C: Integrate four scRNA-seq datas
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.8k
views
Comment: C: RNA-seq STAR genome mapping
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
1.9k
views
Comment: C: How to find all mapped locations of a read from PySam?
4.7 years ago by GouthamAtla 12k
2
votes
1
reply
1.8k
views
Comment: C: filtered tab delimited file with awk
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Comment: C: differential gene expression analysis
4.7 years ago by GouthamAtla 12k
0
votes
2
replies
1.5k
views
Comment: C: differential gene expression analysis
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
821
views
Comment: C: Keeping loci those have specific number of SNPS
4.7 years ago by GouthamAtla 12k
1
vote
2
replies
10.0k
views
Comment: C: merge two SeuratObjects to do the integration
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
10.0k
views
Comment: C: merge two SeuratObjects to do the integration
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
1.6k
views
Comment: C: CTCF motif orientation
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
4.3k
views
Comment: C: How to compute Spearman correlation between numeric and non-numeric data variabl
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Comment: C: Is it possible to remove unwanted tissue contamination in transcriptome analysis
4.7 years ago by GouthamAtla 12k
1
vote
0
replies
1.5k
views
Comment: C: How to calculate Spearman correlation coefficient and p-values between numeric a
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
1.5k
views
Comment: C: Android Apps Suggestions for bioinformatics
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
1.7k
views
Comment: A: Aggreggating RNA-Seq log2FC & test statistics for GSEA ranking
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
3.4k
views
Comment: C: Can we compare bulk RNAseq samples and single cell rnaseq clusters?
4.7 years ago by GouthamAtla 12k
1
vote
0
replies
2.4k
views
Comment: C: Can I enrich a gene expression signature derived from single cell RNA-Seq in a b
4.7 years ago by GouthamAtla 12k
4
votes
1
reply
2.4k
views
Answer: A: Can I enrich a gene expression signature derived from single cell RNA-Seq in a b
4.7 years ago by GouthamAtla 12k
3
votes
1
reply
2.0k
views
Answer: A: high sequence duplication ddRAD
4.7 years ago by GouthamAtla 12k
5
votes
0
replies
3.0k
views
Answer: A: How to normalise RNA-Seq counts for eQTL analysis with MT-eQTL
4.7 years ago by GouthamAtla 12k
1
vote
1
reply
1.2k
views
Answer: C: mRNA-based tissue typing: Which transcripts to choose for primer engineering?
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Comment: C: How to find if our enhancer gene pair fall within TAD
4.7 years ago by GouthamAtla 12k
0
votes
1
reply
4.6k
views
Comment: C: Correlate ChIP-seq to gene expression
4.7 years ago by GouthamAtla 12k
0
votes
2
replies
1.5k
views
Comment: C: How to find if our enhancer gene pair fall within TAD
4.7 years ago by GouthamAtla 12k
2
votes
1
reply
4.6k
views
Comment: C: Correlate ChIP-seq to gene expression
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
5.9k
views
Comment: C: Counting single-cell ATAC fragments at peaks on BED file
4.7 years ago by GouthamAtla 12k
3
votes
0
replies
1.9k
views
Answer: A: WGCNA analysis for gene of interest
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.1k
views
Comment: C: Understanding BEDtools summary output
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
5.9k
views
Comment: C: Counting single-cell ATAC fragments at peaks on BED file
4.7 years ago by GouthamAtla 12k
6
votes
1
reply
5.9k
views
Answer: A: Counting single-cell ATAC fragments at peaks on BED file
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.7k
views
Answer: A: Large differences in eQTLs between GTEx v7 and v8
4.7 years ago by GouthamAtla 12k
3
votes
0
replies
1.8k
views
Answer: A: Coding vs Non-coding DNA
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
1.1k
views
Answer: A: Checking whether the reads aligned to specific gene have the specific exon in BA
4.7 years ago by GouthamAtla 12k
0
votes
0
replies
2.1k
views
Answer: A: How to retrive sequnce from fasta file by using start and end point data from xl
4.7 years ago by GouthamAtla 12k
3
votes
1
reply
1.3k
views
Answer: A: bio python, sequence retrival
updated 4.7 years ago by 22k • written 4.7 years ago by 12k
0
votes
1
reply
1.1k
views
Comment: C: Checking whether the reads aligned to specific gene have the specific exon in BA
4.7 years ago by GouthamAtla 12k
15
votes
5
replies
18k
views
Answer: A: What are the best tools for differential detection between ATAC-seq samples?
4.8 years ago by GouthamAtla 12k
0
votes
1
reply
2.0k
views
Comment: C: What is the appropriate method for clustering a small number of cells?
4.8 years ago by GouthamAtla 12k
0
votes
1
reply
2.0k
views
Comment: C: What is the appropriate method for clustering a small number of cells?
4.8 years ago by GouthamAtla 12k
0
votes
1
reply
2.9k
views
Comment: C: Transcript level counts from full length scRNA data
4.8 years ago by GouthamAtla 12k
8
votes
11
replies
2.9k
views
Transcript level counts from full length scRNA data
scRNA RNA-Seq salmon star
4.8 years ago by GouthamAtla 12k
0
votes
0
replies
2.9k
views
Comment: C: Transcript level counts from full length scRNA data
4.8 years ago by GouthamAtla 12k
0
votes
0
replies
2.3k
views
Answer: A: Removing Unknown Batch Effects and Latent Confounders in Splicing PSI Data
4.9 years ago by GouthamAtla 12k
1,491 results • Page 1 of 30
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6