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Comment: C: WGCNA Settings Help for RNA-Seq Data
4.6 years ago by GouthamAtla 12k
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1.1k
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Comment: C: Looking for superfast heatmap algorithm
4.6 years ago by GouthamAtla 12k
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1.2k
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Answer: A: gene expression correlation positive controls scRNAseq
4.6 years ago by GouthamAtla 12k
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1
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1.1k
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Comment: C: How to get a list of aligned read and reference positions using samtools
4.6 years ago by GouthamAtla 12k
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1.5k
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Answer: A: How to best summarize read counts overlapping promoters when read counts are def
4.6 years ago by GouthamAtla 12k
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0
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1.4k
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Answer: A: extract transcript sequence from bam file to know transcript length in control a
4.6 years ago by GouthamAtla 12k
1
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3.0k
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Comment: C: problem getting Seurat package
4.6 years ago by GouthamAtla 12k
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1.1k
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Answer: A: Do I have adapters in my reads?
4.6 years ago by GouthamAtla 12k
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1
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1.4k
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Comment: C: extract transcript sequence from bam file to know transcript length in control a
4.6 years ago by GouthamAtla 12k
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0
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2.1k
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Comment: C: Batch effect correction in RNASeq data and plot Dendrograms cluster
4.6 years ago by GouthamAtla 12k
1
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0
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1.1k
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Comment: C: How to evaluate the performance of an RNA-seq pipeline
4.6 years ago by GouthamAtla 12k
2
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2.3k
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Comment: C: High logfold change but padj > 0.1 in DESEQ2
4.6 years ago by GouthamAtla 12k
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1
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1.7k
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Comment: C: CellScatter function Seurat not working
4.6 years ago by GouthamAtla 12k
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1
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1.7k
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Comment: C: CellScatter function Seurat not working
4.6 years ago by GouthamAtla 12k
0
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1
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2.1k
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Comment: C: Batch effect correction in RNASeq data and plot Dendrograms cluster
4.6 years ago by GouthamAtla 12k
0
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1
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2.1k
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Answer: A: Batch effect correction in RNASeq data and plot Dendrograms cluster
4.6 years ago by GouthamAtla 12k
2
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2
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3.3k
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Answer: A: from BAM to BED passing cell barcodes
4.6 years ago by GouthamAtla 12k
0
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1
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3.3k
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Comment: C: from BAM to BED passing cell barcodes
4.6 years ago by GouthamAtla 12k
1
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0
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3.3k
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Comment: C: from BAM to BED passing cell barcodes
4.6 years ago by GouthamAtla 12k
0
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1
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1.7k
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Comment: C: Trouble quantifying scRNAseq experiment
4.6 years ago by GouthamAtla 12k
0
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1
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1.7k
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Comment: C: Trouble quantifying scRNAseq experiment
4.6 years ago by GouthamAtla 12k
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0
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1.7k
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Comment: C: average depth across samples
4.6 years ago by GouthamAtla 12k
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0
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1.7k
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Comment: C: average depth across samples
4.6 years ago by GouthamAtla 12k
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1
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1.7k
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Answer: A: average depth across samples
4.6 years ago by GouthamAtla 12k
1
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1
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1.3k
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Answer: A: cell type specific enhancers
4.6 years ago by GouthamAtla 12k
3
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0
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819
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Answer: A: How to distinguish the result of transcriptome sequencing and full exome sequenc
4.6 years ago by GouthamAtla 12k
2
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2.0k
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Comment: C: Remove stop codon containing sequences from multifasta(DNA) files
4.6 years ago by GouthamAtla 12k
1
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0
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867
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Answer: A: How to estimate disease heritability from RNA-seq data?
4.6 years ago by GouthamAtla 12k
0
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0
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2.8k
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Comment: C: Editing BAM file using pysam
4.6 years ago by GouthamAtla 12k
0
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1
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776
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Answer: C: Introns identification in genome reference file
4.6 years ago by GouthamAtla 12k
1
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0
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2.3k
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Comment: C: Downloaded Shapeit via Anaconda, getting a 'Segmentation fault (core dumped)' er
4.6 years ago by GouthamAtla 12k
1
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1
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2.8k
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Answer: A: Editing BAM file using pysam
4.6 years ago by GouthamAtla 12k
0
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0
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2.1k
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Comment: C: Problem with differential analysis between two groups having low raw counts
4.6 years ago by GouthamAtla 12k
0
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0
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1.9k
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Comment: C: Sum up values for a specific column of multiple files
4.6 years ago by GouthamAtla 12k
1
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0
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3.9k
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Answer: A: How to split a heatmap at specific row?
4.6 years ago by GouthamAtla 12k
0
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0
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1.9k
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Comment: C: Reads shown in IGV not quantified by featureCounts
4.6 years ago by GouthamAtla 12k
0
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0
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3.4k
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Comment: C: Feature selected-genes vs. differentially expressed genes
4.6 years ago by GouthamAtla 12k
0
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1
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898
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Comment: C: automation of shell script where I want to change filename after every result
4.6 years ago by GouthamAtla 12k
0
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0
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1.0k
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Comment: A: Is PolyA RNA-seq equal to 3'Tagged RNA-seq?
4.6 years ago by GouthamAtla 12k
0
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2
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2.1k
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Comment: C: Problem with differential analysis between two groups having low raw counts
4.6 years ago by GouthamAtla 12k
1
vote
1
reply
1.9k
views
Comment: C: Reads shown in IGV not quantified by featureCounts
4.6 years ago by GouthamAtla 12k
2
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0
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1.4k
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Answer: A: Count exon-exon junction reads for transcripts
4.6 years ago by GouthamAtla 12k
0
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1
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2.1k
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Comment: C: Problem with differential analysis between two groups having low raw counts
4.6 years ago by GouthamAtla 12k
0
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1
reply
2.1k
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Comment: C: Problem with differential analysis between two groups having low raw counts
4.6 years ago by GouthamAtla 12k
1
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1
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899
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Comment: C: How to select Representative Gene from Gene Expression Modules
4.6 years ago by GouthamAtla 12k
2
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2
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1.2k
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Answer: A: tools for 10X scRNA-seq counts
4.6 years ago by GouthamAtla 12k
0
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0
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2.3k
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Answer: A: Uploading GSEA results to Run Cytoscape
4.6 years ago by GouthamAtla 12k
1
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0
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1.7k
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Answer: A: Retrieving individual cells from scRNA-seq bigWig files?
4.6 years ago by GouthamAtla 12k
0
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0
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1.2k
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Comment: C: tools for 10X scRNA-seq counts
4.6 years ago by GouthamAtla 12k
0
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0
replies
978
views
Comment: C: Differential gene expression
4.6 years ago by GouthamAtla 12k
1,490 results • Page 2 of 30
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