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Comment: C: Differential gene expression
5.0 years ago by GouthamAtla 12k
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1.2k
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Answer: A: Extract longest mRNA from .GFF when I have multiple rows of same seqID
5.0 years ago by GouthamAtla 12k
1
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0
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1.1k
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Answer: A: Coverage of target genes
5.0 years ago by GouthamAtla 12k
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1
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1.8k
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Comment: C: how to label one gene only inside my volcano plot? or to show the gene names but
5.0 years ago by GouthamAtla 12k
1
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1
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1.8k
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Answer: A: how to label one gene only inside my volcano plot? or to show the gene names but
5.0 years ago by GouthamAtla 12k
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0
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1.1k
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Answer: A: Differential gene expression
5.0 years ago by GouthamAtla 12k
1
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0
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1.0k
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Comment: C: ChIP to genes
5.0 years ago by GouthamAtla 12k
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1.2k
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Comment: C: passing vcf.gz and vcg.gz.tbi files in tabix comand while doing range search
5.0 years ago by GouthamAtla 12k
0
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1
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7.4k
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Answer: A: Annotation of Single Cell Clusters
5.0 years ago by GouthamAtla 12k
2
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1.6k
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Answer: A: RNA-Seq analysis of data from different platforms
5.0 years ago by GouthamAtla 12k
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1.6k
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Answer: A: How to use Hi-C data?
5.0 years ago by GouthamAtla 12k
2
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2.4k
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Answer: A: Can I use the SCENIC package to analyze the transcription factors in the bulk RN
5.0 years ago by GouthamAtla 12k
1
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1
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3.4k
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Answer: A: Weird MA-plot (DESeq2)
5.0 years ago by GouthamAtla 12k
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1
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2.6k
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Comment: C: Soft filtering of SNPs in a list
5.0 years ago by GouthamAtla 12k
1
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0
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1.3k
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Answer: A: Annotating narrow.peak to promoter region using GenomicFeatures
5.0 years ago by GouthamAtla 12k
1
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0
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4.8k
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Comment: C: Cutadapt for loop issue
5.0 years ago by GouthamAtla 12k
2
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1
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4.8k
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Comment: C: Cutadapt for loop issue
5.0 years ago by GouthamAtla 12k
1
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2
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4.8k
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Answer: A: Cutadapt for loop issue
5.0 years ago by GouthamAtla 12k
0
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1
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3.8k
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Comment: C: Feature selected-genes vs. differentially expressed genes
5.0 years ago by GouthamAtla 12k
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0
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1.7k
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Comment: C: CALCULATING Z-SCORE from GWAS summary statistics.
5.0 years ago by GouthamAtla 12k
2
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1
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1.9k
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Comment: C: HOMER error -bash: ./ctcf.motif: Permission denied
5.0 years ago by GouthamAtla 12k
1
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0
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3.1k
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Comment: C: Computing significance of overlap between two gene lists in Python
5.0 years ago by GouthamAtla 12k
1
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2
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151k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.1 years ago by 45k • written 10.3 years ago by 12k
109
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15
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123k
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16 follow
Convertion Of Gff3 To Gtf
gtf gff
updated 13 months ago by ▴ 140 • written 12.9 years ago by 12k
0
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1
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4.0k
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Comment: C: Differential binding analysis of motif-containing peaks
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
2
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1
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4.0k
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Answer: A: Differential binding analysis of motif-containing peaks
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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3.4k
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Answer: A: bedtools intersect: keep pairing consistent
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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3.4k
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Comment: C: bedtools intersect: keep pairing consistent
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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3.4k
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Comment: C: bedtools intersect: keep pairing consistent
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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0
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37k
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Comment: C: Estimating Insert Size From Paired End Data.
updated 5.3 years ago by 45k • written 11.1 years ago by 12k
0
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1
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12k
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Comment: C: FreeBayes vs GATK's HaplotypeCaller
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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5.2k
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Comment: C: Extract Sequences From [Gtf File] + [Genome Fasta File], combine matching XLOCs
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
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2
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5.2k
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Answer: A: Extract Sequences From [Gtf File] + [Genome Fasta File], combine matching XLOCs
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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0
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1.7k
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Comment: C: identification of genes from contigs using reference genome
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
2
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1
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5.3k
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Answer: Answer: How to find sequence patterns in genome?
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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0
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4.0k
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Comment: C: Can I convert a .mol to a .pdb
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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4.0k
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Comment: C: Can I convert a .mol to a .pdb
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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2.3k
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Comment: C: how sequenced? dna between the pair-end reads
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
0
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1
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8.6k
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Comment: C: BLAST source code
updated 5.3 years ago by 45k • written 9.2 years ago by 12k
3
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1
reply
6.1k
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Answer: Answer: HOWTO extract regions from GRanges object
updated 2.7 years ago by 45k • written 9.3 years ago by 12k
1
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0
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8.2k
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Answer: A: Where can i find some bacterial RNA-Seq data?
updated 5.3 years ago by 45k • written 11.0 years ago by 12k
0
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1
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2.8k
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Comment: C: chip-seq (histone modifications) and rna-seq data for benchmarking
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
3
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1
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3.3k
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Answer: A: Pipeline for RNA-seq analysis
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
0
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0
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3.9k
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Comment: C: How to get individual chromosome sequence in fasta format from vcf.gz and its vc
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
2
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1
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3.9k
views
Answer: Answer: How to get individual chromosome sequence in fasta format from vcf.gz and its vc
updated 2.7 years ago by 45k • written 9.3 years ago by 12k
0
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0
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3.4k
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Comment: C: annote gene position using hg19
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
3
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1
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5.6k
views
Answer: A: How to extract coordinates of first exons from .gtf file.
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
3
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0
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8.1k
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Answer: A: how to retrieve the nucleotide/base in a certain position using any programming
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
0
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1
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2.9k
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Comment: C: Retriving the base and its quality from fastq file
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
0
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1
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11k
views
Comment: C: Paired End Trimmomatic producing asymmetric paired read files.
updated 5.3 years ago by 45k • written 9.3 years ago by 12k
1,491 results • Page 3 of 30
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