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3
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1
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3.0k
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Answer: A: Duplicated ATAC-Seq peaks called by MACS2
5.8 years ago by GouthamAtla 12k
0
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0
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1.9k
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Comment: C: Integrating NGS Data for Machine Learning
5.8 years ago by GouthamAtla 12k
1
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1
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13k
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Answer: C: Outliers from RNA_seq data
5.8 years ago by GouthamAtla 12k
1
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1
reply
1.4k
views
Answer: A: Correlation matrix between enhancers and promoters (human)?
5.8 years ago by GouthamAtla 12k
0
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1
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1.7k
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Answer: A: Assembly database choice for RNA-seq and ChIP-seq
5.8 years ago by GouthamAtla 12k
0
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0
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1.5k
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Answer: A: Filtering SCRNAseq dataset
5.8 years ago by GouthamAtla 12k
0
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0
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1.3k
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Comment: C: how to use tool installed in local directory to work in script to submit job on
5.9 years ago by GouthamAtla 12k
1
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0
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2.8k
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Answer: A: ChIP-Seq annotation question: Should gene annotation based on the nearest TSS or
5.9 years ago by GouthamAtla 12k
0
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1
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1.7k
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Comment: C: Identifying shared exact sequence variants between two datasets
5.9 years ago by GouthamAtla 12k
0
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0
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2.8k
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Comment: C: Aligning RNA-seq and ATAC-seq gene annotations
5.9 years ago by GouthamAtla 12k
1
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0
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1.2k
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Answer: A: How to extract un annotated (With abundant) small RNA transcript?
5.9 years ago by GouthamAtla 12k
0
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0
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7.4k
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Comment: C: How to find out whether Chip-seq peaks falls within promoter or enhancer region
5.9 years ago by GouthamAtla 12k
0
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0
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7.4k
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Comment: C: How to find out whether Chip-seq peaks falls within promoter or enhancer region
5.9 years ago by GouthamAtla 12k
0
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1
reply
7.4k
views
Comment: C: How to find out whether Chip-seq peaks falls within promoter or enhancer region
5.9 years ago by GouthamAtla 12k
1
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0
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5.3k
views
Answer: A: Remove overlapping features from a gtf file?
5.9 years ago by GouthamAtla 12k
0
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1
reply
53k
views
Comment: C: How Can I Convert Bam/Sam To Wiggle
updated 6.1 years ago by 44k • written 10.1 years ago by 12k
1
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0
replies
1.4k
views
Answer: A: Sequenced sample twice, can I merge the fastqs to analyze?
6.1 years ago by GouthamAtla 12k
1
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0
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4.6k
views
Answer: A: extracting reads from BAM files for gene coordinates Tx start Txs end
updated 6.2 years ago by 44k • written 9.7 years ago by 12k
1
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0
replies
2.5k
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Answer: C: denovo analysis of rna seq data
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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0
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2.7k
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Comment: C: Malformed SAM line error with HTSeq
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
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0
replies
4.1k
views
Answer: A: Sort Sequences In A Fasta File According To The peg List
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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1
reply
2.0k
views
Answer: A: algorithm for cluster analysis of illumina microarray data
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
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0
replies
1.7k
views
Answer: A: Help in Trinity
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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0
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20k
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Comment: C: GO analysis: DAVID vs GREAT vs GOrilla
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
2
votes
2
replies
20k
views
Answer: A: GO analysis: DAVID vs GREAT vs GOrilla
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
vote
0
replies
8.4k
views
Comment: C: Unable to install "org.Hs.eg.db"
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
vote
2
replies
8.4k
views
Comment: C: Unable to install "org.Hs.eg.db"
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
2
votes
1
reply
2.0k
views
Answer: C: How can you check if the downsampler in indeed random and efficient
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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0
replies
2.4k
views
Answer: C: Error with combining samples into matrix using abundance_estimates_to_matrix.pl
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
2
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1
reply
2.0k
views
Comment: C: Change fasta file header to include number of times a read apears
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
vote
1
reply
8.1k
views
Comment: C: RPKM to FPKM conversion
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
votes
1
reply
1.8k
views
Comment: C: Probability of up/downregulation occuring by chance
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
4
votes
1
reply
2.5k
views
Answer: A: awk? how to retrieve info from massive Primer3 output file
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
3
votes
1
reply
2.2k
views
Answer: C: [GATK] Weird error using Picard SortVcf on COSMIC file
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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1
reply
2.9k
views
Comment: C: blast running for several splitted query
updated 6.2 years ago by 44k • written 9.6 years ago by 12k
0
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0
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1.7k
views
Comment: C: remove duplicated gene pairs
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
0
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1
reply
1.7k
views
Comment: C: remove duplicated gene pairs
updated 6.2 years ago by 44k • written 8.8 years ago by 12k
1
vote
0
replies
1.3k
views
Comment: C: How to approach QTL for transcriptomic data?
6.3 years ago by GouthamAtla 12k
2
votes
1
reply
1.3k
views
Comment: C: How to approach QTL for transcriptomic data?
6.3 years ago by GouthamAtla 12k
0
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1
reply
2.2k
views
Comment: C: macs2 find different binding sites
6.4 years ago by GouthamAtla 12k
0
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0
replies
1.3k
views
Answer: A: Question on BIGWIG tracks from Chip Seq experiments
6.4 years ago by GouthamAtla 12k
1
vote
0
replies
1.2k
views
Answer: A: Separate non-coding RNA from total RNA list
6.4 years ago by GouthamAtla 12k
1
vote
0
replies
1.6k
views
Answer: A: Best database for human mRNA expression information from different tissues?
6.5 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Answer: A: Disease/Trait SNPs Enrichment Analysis
6.5 years ago by GouthamAtla 12k
0
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0
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1.5k
views
Comment: C: Noncoding RNA and protein coding gene co expression
6.5 years ago by GouthamAtla 12k
2
votes
0
replies
2.0k
views
Answer: A: Genome-wide CRISPR/Cas9 and gene expression?
6.5 years ago by GouthamAtla 12k
0
votes
1
reply
2.0k
views
Comment: C: Genome-wide CRISPR/Cas9 and gene expression?
6.5 years ago by GouthamAtla 12k
0
votes
1
reply
2.0k
views
Comment: C: Genome-wide CRISPR/Cas9 and gene expression?
6.5 years ago by GouthamAtla 12k
1
vote
1
reply
2.0k
views
Comment: C: Genome-wide CRISPR/Cas9 and gene expression?
6.5 years ago by GouthamAtla 12k
1
vote
2
replies
1.4k
views
Comment: C: I do not find DEG's with EdgeR that I do find with other tools
6.5 years ago by GouthamAtla 12k
1,490 results • Page 7 of 30
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