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2
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656
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Answer: Answer: How to filter columns in a raw sparse matrix in R
8 months ago by bk11 ★ 3.0k
0
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0
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938
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Comment: Comment: Rename multiple fastq.gz files
8 months ago by bk11 ★ 3.0k
0
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1
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938
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Comment: Comment: Rename multiple fastq.gz files
8 months ago by bk11 ★ 3.0k
1
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1
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938
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Answer: Answer: Rename multiple fastq.gz files
8 months ago by bk11 ★ 3.0k
0
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0
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466
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Comment: Comment: How to get the reference panel sites for TOPMed hg37 and 38
8 months ago by bk11 ★ 3.0k
0
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0
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811
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Answer: Answer: convert h5ad to rds
8 months ago by bk11 ★ 3.0k
0
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0
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1.1k
views
Comment: Comment: 99.9999% of Q30 bases is normal?
8 months ago by bk11 ★ 3.0k
2
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1
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540
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Comment: Comment: Addmetadata to seurat obj
8 months ago by bk11 ★ 3.0k
1
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1
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485
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Comment: Comment: convert a seurat object to expressionset
8 months ago by bk11 ★ 3.0k
0
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1
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1.2k
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
8 months ago by bk11 ★ 3.0k
1
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0
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554
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Comment: Comment: Cell type classification using an integrated reference
8 months ago by bk11 ★ 3.0k
0
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0
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355
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Answer: Answer: RNA-seq with normalized cpm count
9 months ago by bk11 ★ 3.0k
0
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1
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904
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Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
9 months ago by bk11 ★ 3.0k
1
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1
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642
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Answer: Answer: Seurat: CreateSeuratObject error, please help
9 months ago by bk11 ★ 3.0k
3
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0
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954
views
Answer: Answer: SHAPEIT5 phasing
9 months ago by bk11 ★ 3.0k
1
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1
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698
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Comment: Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
10 months ago by bk11 ★ 3.0k
0
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1
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520
views
Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
10 months ago by bk11 ★ 3.0k
1
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1
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1.3k
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Comment: Comment: ensembl - selecting SNPs of specific genes
10 months ago by bk11 ★ 3.0k
0
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1
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1.3k
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Comment: Comment: ensembl - selecting SNPs of specific genes
10 months ago by bk11 ★ 3.0k
1
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1
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1.3k
views
Comment: Comment: ensembl - selecting SNPs of specific genes
10 months ago by bk11 ★ 3.0k
3
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1
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1.3k
views
Answer: Answer: ensembl - selecting SNPs of specific genes
10 months ago by bk11 ★ 3.0k
1
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0
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379
views
Answer: Answer: 1000 genome project specific genes selection
10 months ago by bk11 ★ 3.0k
0
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0
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1.0k
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Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
10 months ago by bk11 ★ 3.0k
0
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0
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417
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Comment: Comment: X chromosome inactivation
10 months ago by bk11 ★ 3.0k
0
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0
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454
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Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
10 months ago by bk11 ★ 3.0k
0
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0
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781
views
Comment: Comment: Need suggestions for ROC Curve in R
10 months ago by bk11 ★ 3.0k
0
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0
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405
views
Comment: Comment: CellPlex CMO highbackground
10 months ago by bk11 ★ 3.0k
0
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1
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834
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 months ago by bk11 ★ 3.0k
0
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1
reply
834
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 months ago by bk11 ★ 3.0k
0
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1
reply
701
views
Comment: Comment: How to choose --hwe threshold?
10 months ago by bk11 ★ 3.0k
1
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0
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781
views
Comment: Comment: Merge seurat list
10 months ago by bk11 ★ 3.0k
0
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0
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586
views
Comment: Comment: GO enrichment plot with dotplot strange axis
10 months ago by bk11 ★ 3.0k
1
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1
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781
views
Answer: Answer: Merge seurat list
10 months ago by bk11 ★ 3.0k
0
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1
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586
views
Comment: Comment: GO enrichment plot with dotplot strange axis
10 months ago by bk11 ★ 3.0k
2
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1
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758
views
Answer: Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 10 months ago by 44k • written 10 months ago by ★ 3.0k
2
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1
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5.5k
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Answer: Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
10 months ago by bk11 ★ 3.0k
0
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1
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730
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Comment: Comment: How to find SNP locations in assemblies other than hg38
10 months ago by bk11 ★ 3.0k
1
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0
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503
views
Answer: Answer: Extract information of mapped reads bam files
10 months ago by bk11 ★ 3.0k
2
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1
reply
1.9k
views
Comment: Comment: Shrink logFC values after edgeR
10 months ago by bk11 ★ 3.0k
0
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0
replies
420
views
Comment: Comment: Is it possible to identify the strand of an RNA using UMI?
10 months ago by bk11 ★ 3.0k
0
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1
reply
943
views
Comment: Comment: Does salmon work with combined short and long read bam file?
10 months ago by bk11 ★ 3.0k
0
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1
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804
views
Comment: Comment: allele matching between identical genotypes
10 months ago by bk11 ★ 3.0k
0
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0
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343
views
Comment: Comment: EnhancedVolcanop plot using GSE data
10 months ago by bk11 ★ 3.0k
1
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1
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801
views
Comment: Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
10 months ago by bk11 ★ 3.0k
2
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1
reply
1.1k
views
Comment: Comment: PCA plot interpretation (single population)
10 months ago by bk11 ★ 3.0k
0
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0
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448
views
Answer: Answer: Obtain rsID GWAS variants (9M)
10 months ago by bk11 ★ 3.0k
2
votes
0
replies
649
views
Answer: Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
10 months ago by bk11 ★ 3.0k
0
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1
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598
views
Comment: Comment: GEO Affymetrix data for differential expression analysis?
11 months ago by bk11 ★ 3.0k
1
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0
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686
views
Comment: Comment: Transcript Based Annotation of Variants Using Annovar
11 months ago by bk11 ★ 3.0k
0
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1
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628
views
Comment: Comment: Freyja tool help
11 months ago by bk11 ★ 3.0k
473 results • Page 3 of 10
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