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Comment: Comment: No valid chromosomes found! on Michigan Imputation Server
14 months ago by bk11 ★ 3.0k
4
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0
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1.2k
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Answer: Answer: Annoate complex heatmap columns
14 months ago by bk11 ★ 3.0k
0
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0
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765
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Answer: Answer: What do HAP A1 and HAP A2 mean in plink --freqx output?
14 months ago by bk11 ★ 3.0k
2
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1
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765
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Comment: Comment: Can I still remove ambient RNA if I do not have raw barcode-gene matrix?
14 months ago by bk11 ★ 3.0k
0
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0
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1.9k
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Comment: Comment: Cannot add new cells with NormalizeData from seurat
14 months ago by bk11 ★ 3.0k
0
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1
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2.2k
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Comment: Comment: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
14 months ago by bk11 ★ 3.0k
0
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1
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2.2k
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Comment: Comment: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
14 months ago by bk11 ★ 3.0k
0
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1
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2.2k
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Comment: Comment: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
14 months ago by bk11 ★ 3.0k
0
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1
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2.2k
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Comment: Comment: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
14 months ago by bk11 ★ 3.0k
0
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2
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2.2k
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Comment: Comment: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
14 months ago by bk11 ★ 3.0k
3
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0
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817
views
Comment: Comment: PLINK .ped file issue
14 months ago by bk11 ★ 3.0k
4
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1
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811
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Answer: Answer: Pre-imputation checks using 1000G data (hg19) for a hg38 VCF
14 months ago by bk11 ★ 3.0k
1
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1
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3.1k
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Answer: Answer: Seurat changing order cluster shown in the violin plot
14 months ago by bk11 ★ 3.0k
0
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0
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683
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Answer: Answer: Changing LFC font size on Complex Heatmap
14 months ago by bk11 ★ 3.0k
0
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0
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479
views
Comment: Comment: DESeq2 : standardising variation between treatments
14 months ago by bk11 ★ 3.0k
1
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0
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1.0k
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Answer: Answer: pheatmap
14 months ago by bk11 ★ 3.0k
0
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0
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1.4k
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Comment: Comment: Differentially Expressed Genes between two conditions (scRNA, single GEO dataset
14 months ago by bk11 ★ 3.0k
2
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1
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1.4k
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Comment: Comment: Differentially Expressed Genes between two conditions (scRNA, single GEO dataset
14 months ago by bk11 ★ 3.0k
3
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1
reply
707
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Answer: Answer: Feature plot not applicable for RunTSNE object in seurat?
14 months ago by bk11 ★ 3.0k
0
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0
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872
views
Comment: Comment: QC of genetic data
14 months ago by bk11 ★ 3.0k
3
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1
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1.2k
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Answer: Answer: Exporting DEGs obtained from DESeq2
14 months ago by bk11 ★ 3.0k
0
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1
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1.2k
views
Comment: Comment: Exporting DEGs obtained from DESeq2
14 months ago by bk11 ★ 3.0k
0
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0
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922
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Answer: Answer: GOSt Plot
14 months ago by bk11 ★ 3.0k
0
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0
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1.3k
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Comment: Comment: counting from a single BAM file with multiple samples
14 months ago by bk11 ★ 3.0k
0
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1
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2.0k
views
Comment: Comment: Help with error running velocyto
14 months ago by bk11 ★ 3.0k
1
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1
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2.0k
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Comment: Comment: Help with error running velocyto
14 months ago by bk11 ★ 3.0k
2
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1
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2.0k
views
Answer: Answer: Help with error running velocyto
14 months ago by bk11 ★ 3.0k
1
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1
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1.9k
views
Comment: Comment: How to get the gft file to run velocyto for velocity analysis?
14 months ago by bk11 ★ 3.0k
0
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1
reply
1.4k
views
Answer: Answer: Search RCSB with a list of protein names?
14 months ago by bk11 ★ 3.0k
0
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1
reply
872
views
Comment: Comment: QC of genetic data
14 months ago by bk11 ★ 3.0k
0
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1
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794
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Comment: Comment: Quality Control of VCFs that used different genotyping arrays
14 months ago by bk11 ★ 3.0k
0
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0
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1.1k
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Comment: Comment: Subclustering of intergated cells from scRNA-seq data
14 months ago by bk11 ★ 3.0k
2
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0
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720
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Answer: Answer: Imputation server failing to see samples in VCF files
14 months ago by bk11 ★ 3.0k
0
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0
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573
views
Comment: Comment: Issue with merging in plink and eigensoft.
15 months ago by bk11 ★ 3.0k
1
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1
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3.8k
views
Comment: Comment: Clustering in single cell
15 months ago by bk11 ★ 3.0k
3
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1
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1.7k
views
Answer: Answer: How to convert data in r?
updated 14 months ago by 44k • written 15 months ago by ★ 3.0k
1
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1
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2.2k
views
Answer: Answer: Converting hdf5 file to loom file
15 months ago by bk11 ★ 3.0k
0
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1
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846
views
Comment: Comment: comparision of umap single cell
15 months ago by bk11 ★ 3.0k
2
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0
replies
2.0k
views
Comment: Comment: How to filter vcf file by MAF using bcftools?
15 months ago by bk11 ★ 3.0k
0
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2
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2.0k
views
Comment: Comment: How to filter vcf file by MAF using bcftools?
15 months ago by bk11 ★ 3.0k
0
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0
replies
1.3k
views
Comment: Comment: Number of accessible regions included by DESeq2 to generate the PCA plot with th
15 months ago by bk11 ★ 3.0k
0
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1
reply
896
views
Comment: Comment: Detect STRs in illumina library
15 months ago by bk11 ★ 3.0k
0
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1
reply
1.4k
views
Comment: Comment: Violin plot (Monocle 3) - Troubleshooting
15 months ago by bk11 ★ 3.0k
0
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1
reply
3.5k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
15 months ago by bk11 ★ 3.0k
0
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1
reply
1.4k
views
Comment: Comment: Violin plot (Monocle 3) - Troubleshooting
15 months ago by bk11 ★ 3.0k
0
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1
reply
3.5k
views
Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
15 months ago by bk11 ★ 3.0k
0
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1
reply
3.5k
views
Answer: Answer: How to plot proportion of cells in each cluster with scanpy?
15 months ago by bk11 ★ 3.0k
0
votes
1
reply
1.4k
views
Answer: Answer: Violin plot (Monocle 3) - Troubleshooting
updated 15 months ago by 44k • written 15 months ago by ★ 3.0k
1
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1
reply
698
views
Answer: Answer: miRDeep2 - identifying miRNAs from deep sequencing data
15 months ago by bk11 ★ 3.0k
0
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0
replies
980
views
Comment: Comment: Identifying common DEGs among multiple datasets
15 months ago by bk11 ★ 3.0k
473 results • Page 5 of 10
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