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679
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Answer: Answer: Differential gene expression with specif genes of interest
16 months ago by bk11 ★ 3.0k
0
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0
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1.4k
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Answer: Answer: Performing differential expression analysis after applying transformations on my
16 months ago by bk11 ★ 3.0k
2
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1
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1.2k
views
Answer: Answer: is it correct to normalize batch corrected data?
16 months ago by bk11 ★ 3.0k
4
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0
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1.0k
views
Answer: Answer: Heatmap in R; how to change the order of Row names
updated 16 months ago by 44k • written 16 months ago by ★ 3.0k
1
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2
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1.4k
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Comment: Comment: Heatmap Annotation in R
16 months ago by bk11 ★ 3.0k
1
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1
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1.4k
views
Answer: Answer: Heatmap Annotation in R
16 months ago by bk11 ★ 3.0k
0
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0
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669
views
Answer: Answer: Question with manipulating OD gene list when running PCA
16 months ago by bk11 ★ 3.0k
1
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1
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717
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Answer: Answer: I have a FASTA file. I want to extract from some sequence using seqtk. What shou
16 months ago by bk11 ★ 3.0k
1
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1
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1.4k
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Answer: Answer: Microarray - multiple probe-ids matching to the same gene symbol but different e
16 months ago by bk11 ★ 3.0k
0
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1
reply
960
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Answer: Answer: how to chage scaffold number
16 months ago by bk11 ★ 3.0k
0
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1
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1.3k
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Answer: Answer: matching gnomAD allele frequency
16 months ago by bk11 ★ 3.0k
2
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1
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1.3k
views
Answer: Answer: Can I aggregate visium data from different samples using harmony?
16 months ago by bk11 ★ 3.0k
2
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1
reply
903
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Answer: Answer: ComplexHeatmap with anno_barplot
16 months ago by bk11 ★ 3.0k
0
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1
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1.1k
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Answer: Answer: Why FindMarkers between conditions shows pct.1 and pct.2 as 1 for most of the ge
18 months ago by bk11 ★ 3.0k
0
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0
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890
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Comment: Comment: About inconsistent cell counts per samples obtained in small nuclear RNAseq data
19 months ago by bk11 ★ 3.0k
0
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2
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890
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About inconsistent cell counts per samples obtained in small nuclear RNAseq data.
Seurat QC Single-Cell
19 months ago by bk11 ★ 3.0k
1
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0
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4.7k
views
Comment: Comment: How to add Seurat Object name in DimPlot title?
3.0 years ago by bk11 ★ 3.0k
3
votes
2
replies
4.7k
views
How to add Seurat Object name in DimPlot title?
Seurat R
updated 3.0 years ago by 13k • written 3.0 years ago by ★ 3.0k
1
vote
1
reply
941
views
How to perform custom annotation using garfield_annotate_uk10k.sh script in GARFIELD tool?
R bash awk GWAS
updated 5 months ago by 44k • written 3.8 years ago by ★ 3.0k
3
votes
8
replies
2.8k
views
combine columns from multiple files
bash
updated 5.1 years ago by ▴ 100 • written 6.1 years ago by ★ 3.0k
1
vote
4
replies
2.7k
views
cvnkit: what is the problem here?
CNV NGS
updated 5.4 years ago by 20 • written 7.2 years ago by ★ 3.0k
2
votes
13
replies
2.7k
views
Extract gene lists using two files
Unix awk shell script
updated 5.5 years ago by 20 • written 7.2 years ago by ★ 3.0k
0
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0
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22k
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Comment: C: Merging bed bim fam files from chromosome 1 to 22 at one time
5.9 years ago by bk11 ★ 3.0k
1
vote
3
replies
3.9k
views
Problem with newSCESet(countData=all.counts) function
single cell experiment single cell RNA seq
updated 5.9 years ago by 5.8k • written 5.9 years ago by ★ 3.0k
0
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0
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3.9k
views
Comment: C: Problem with newSCESet(countData=all.counts) function
5.9 years ago by bk11 ★ 3.0k
0
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0
replies
1.9k
views
Comment: C: target gene selection for miRNA
6.0 years ago by bk11 ★ 3.0k
1
vote
10
replies
3.9k
views
bedtools complement error
bedtools
updated 6.1 years ago by 36k • written 6.1 years ago by ★ 3.0k
0
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1
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3.9k
views
Comment: C: bedtools complement error
6.1 years ago by bk11 ★ 3.0k
0
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2
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3.9k
views
Comment: C: bedtools complement error
6.1 years ago by bk11 ★ 3.0k
0
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1
reply
2.1k
views
Comment: C: How to identify RNA-seq mapped reads to reference genome but not identified by f
6.1 years ago by bk11 ★ 3.0k
0
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1
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2.1k
views
Comment: C: How to identify RNA-seq mapped reads to reference genome but not identified by f
6.1 years ago by bk11 ★ 3.0k
2
votes
6
replies
2.1k
views
How to identify RNA-seq mapped reads to reference genome but not identified by featurecounts of Subread package?
RNA-Seq featureCounts HISAT2
updated 6.1 years ago by ★ 4.1k • written 6.1 years ago by ★ 3.0k
5
votes
17
replies
3.3k
views
awk and sed in bash script and no output
bash sed awk
updated 6.1 years ago by 36k • written 6.1 years ago by ★ 3.0k
0
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1
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3.3k
views
Comment: C: awk and sed in bash script and no output
6.1 years ago by bk11 ★ 3.0k
0
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1
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3.3k
views
Comment: C: awk and sed in bash script and no output
6.1 years ago by bk11 ★ 3.0k
0
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0
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3.3k
views
Comment: C: awk and sed in bash script and no output
6.1 years ago by bk11 ★ 3.0k
0
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1
reply
3.3k
views
Comment: C: awk and sed in bash script and no output
6.1 years ago by bk11 ★ 3.0k
0
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1
reply
2.8k
views
Comment: C: combine columns from multiple files
6.1 years ago by bk11 ★ 3.0k
0
votes
1
reply
1.8k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
updated 6.2 years ago by 44k • written 6.2 years ago by ★ 3.0k
1
vote
1
reply
1.8k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
6.2 years ago by bk11 ★ 3.0k
12
votes
12
replies
1.8k
views
Add text in somewhere middle of line using information from the same line in file.
sed awk unix
updated 6.2 years ago by 21k • written 6.2 years ago by ★ 3.0k
0
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1
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1.8k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
6.2 years ago by bk11 ★ 3.0k
0
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1
reply
1.5k
views
Comment: C: Heatmap using publicly available Chip-Seq data
6.2 years ago by bk11 ★ 3.0k
0
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1
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1.5k
views
Comment: C: Heatmap using publicly available Chip-Seq data
6.2 years ago by bk11 ★ 3.0k
0
votes
5
replies
1.5k
views
Heatmap using publicly available Chip-Seq data
ChIP-Seq heatmap bigBed bigWig Blueprint
6.2 years ago by bk11 ★ 3.0k
1
vote
3
replies
1.1k
views
Calculating average using information from three different columns of a file.
Unix R Python
updated 6.2 years ago by 12k • written 6.2 years ago by ★ 3.0k
0
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1
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3.5k
views
Comment: C: Quantile Normalization in R and output data
6.2 years ago by bk11 ★ 3.0k
1
vote
3
replies
3.5k
views
Quantile Normalization in R and output data
R Data normalization
6.2 years ago by bk11 ★ 3.0k
1
vote
1
reply
18k
views
Comment: C: Quantile Normalization in R
6.2 years ago by bk11 ★ 3.0k
0
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0
replies
2.3k
views
Comment: C: How to extract genes 10000 bp upstream and 1000 bp downstream of long non coding
6.8 years ago by bk11 ★ 3.0k
473 results • Page 9 of 10
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