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Issues installing PhyloCSF for VEP: opam install ocamlbuild
PhyloCSF VEP ensembl
updated 19 months ago by ▴ 30 • written 4.8 years ago by ▴ 120
0
votes
4
replies
2.9k
views
DBD::SQLite::db prepare failed: no such table: phylocsf_summary
vep loftee phylocsf
updated 4.6 years ago by 20 • written 4.8 years ago by ▴ 120
0
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0
replies
2.9k
views
Comment: C: DBD::SQLite::db prepare failed: no such table: phylocsf_summary
4.7 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
1.5k
views
Comment: C: bcftools view gives empty file when trying to subset it
4.8 years ago by nikitavlassenko ▴ 120
2
votes
3
replies
1.5k
views
bcftools view gives empty file when trying to subset it
bcftools
4.8 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
2.9k
views
Comment: C: DBD::SQLite::db prepare failed: no such table: phylocsf_summary
4.8 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
971
views
Debugging VEP issue: no debug output present
vep debugging
4.8 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
5.9k
views
Comment: C: Running VEP without --cache
4.8 years ago by nikitavlassenko ▴ 120
4
votes
3
replies
5.9k
views
Running VEP without --cache
vep
updated 4.8 years ago by 85k • written 4.8 years ago by ▴ 120
3
votes
0
replies
11k
views
Answer: A: Issues installing new VEP: Bio::DB:HTS library not found
4.8 years ago by nikitavlassenko ▴ 120
7
votes
6
replies
11k
views
Issues installing new VEP: Bio::DB:HTS library not found
VEP
4.8 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
11k
views
Comment: C: Issues installing new VEP: Bio::DB:HTS library not found
4.8 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
11k
views
Comment: C: Issues installing new VEP: Bio::DB:HTS library not found
4.8 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
6.1k
views
Comment: C: Extract columns from VCF file using bcftools preserving all the header info
4.8 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
3.7k
views
Comment: C: Convert VCF4.1 to VCF4.2 using bcftools (preferrably)
4.9 years ago by nikitavlassenko ▴ 120
1
vote
3
replies
3.7k
views
Convert VCF4.1 to VCF4.2 using bcftools (preferrably)
bcftools vcf
updated 4.9 years ago by 44k • written 4.9 years ago by ▴ 120
0
votes
0
replies
1.6k
views
Comment: C: Where to get GERP_scores.final.sorted.txt.gz for VEP analysis
5.0 years ago by nikitavlassenko ▴ 120
1
vote
2
replies
1.6k
views
Where to get GERP_scores.final.sorted.txt.gz for VEP analysis
vep hail gerp
updated 5.0 years ago by 147k • written 5.0 years ago by ▴ 120
7
votes
2
replies
6.1k
views
Extract columns from VCF file using bcftools preserving all the header info
bcftools VCF
updated 5.0 years ago by 16k • written 5.0 years ago by ▴ 120
0
votes
0
replies
1.3k
views
Answer: A: Automatic parsing of VCF and correcting value types
5.0 years ago by nikitavlassenko ▴ 120
0
votes
6
replies
1.3k
views
Automatic parsing of VCF and correcting value types
VCF nan
5.0 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
1.3k
views
Comment: C: Automatic parsing of VCF and correcting value types
5.0 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
1.3k
views
Comment: C: Automatic parsing of VCF and correcting value types
5.0 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
1.3k
views
Comment: C: Automatic parsing of VCF and correcting value types
5.0 years ago by nikitavlassenko ▴ 120
1
vote
1
reply
2.0k
views
Normalization method for single-cell RNAseq to be able to compare between datasets
RNA-Seq python R
updated 6.1 years ago by • 0 • written 6.2 years ago by ▴ 120
0
votes
1
reply
1.6k
views
Comment: C: Differential gene analysis from a javascript based web app
6.2 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
1.6k
views
Comment: C: Differential gene analysis from a javascript based web app
6.2 years ago by nikitavlassenko ▴ 120
1
vote
5
replies
1.6k
views
Differential gene analysis from a javascript based web app
Javascript R DESeq2
6.2 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
1.9k
views
Common Gene Expression Pattern From Matrix
RNA-Seq R
6.5 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
1.9k
views
Answer: A: Common Gene Expression Pattern From Matrix
6.5 years ago by nikitavlassenko ▴ 120
8
votes
4
replies
8.3k
views
Sample outlier detection in DESeq2
DESeq2 rna-seq
updated 6.6 years ago by 147k • written 6.6 years ago by ▴ 120
0
votes
1
reply
1.4k
views
Comment: C: API for cells gene expression levels
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
1.4k
views
Comment: C: API for cells gene expression levels
6.6 years ago by nikitavlassenko ▴ 120
6
votes
10
replies
5.5k
views
10X scRNA-seq sample sheet generation issue
sequencing bcl fastq 10X
updated 6.6 years ago by 147k • written 6.6 years ago by ▴ 120
0
votes
0
replies
1.4k
views
Comment: C: API for cells gene expression levels
6.6 years ago by nikitavlassenko ▴ 120
0
votes
0
replies
1.4k
views
Comment: C: API for cells gene expression levels
6.6 years ago by nikitavlassenko ▴ 120
1
vote
7
replies
1.4k
views
API for cells gene expression levels
genome iOS Database
6.6 years ago by nikitavlassenko ▴ 120
4
votes
15
replies
7.0k
views
bcl2fastq: Could not parse the CSV stream text
sequencing fastq bcl
updated 3.1 years ago by • 0 • written 6.6 years ago by ▴ 120
0
votes
1
reply
7.0k
views
Comment: C: bcl2fastq: Could not parse the CSV stream text
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
7.0k
views
Comment: C: bcl2fastq: Could not parse the CSV stream text
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
7.0k
views
Comment: C: bcl2fastq: Could not parse the CSV stream text
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
7.0k
views
Comment: C: bcl2fastq: Could not parse the CSV stream text
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
7.0k
views
Comment: C: bcl2fastq: Could not parse the CSV stream text
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
5.5k
views
Comment: C: 10X scRNA-seq sample sheet generation issue
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
5.5k
views
Comment: C: 10X scRNA-seq sample sheet generation issue
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
5.5k
views
Comment: C: 10X scRNA-seq sample sheet generation issue
6.6 years ago by nikitavlassenko ▴ 120
7
votes
11
replies
5.0k
views
scRNA-seq data processing from 10X device
rna-seq 10x genomics scRNA-seq
updated 6.6 years ago by 147k • written 6.6 years ago by ▴ 120
0
votes
1
reply
5.0k
views
Comment: C: scRNA-seq data processing from 10X device
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
5.0k
views
Comment: C: scRNA-seq data processing from 10X device
6.6 years ago by nikitavlassenko ▴ 120
0
votes
1
reply
5.0k
views
Comment: C: scRNA-seq data processing from 10X device
6.6 years ago by nikitavlassenko ▴ 120
51 results • Page 1 of 2
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