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0
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0
replies
3.6k
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Comment:
Comment: how to modify some tiplabs in ggtree?
3.6 years ago by
molly77
▴ 10
0
votes
0
replies
556
views
Plot Categorical Traits on Terminal Nodes of Tree using Character Matrix
charactermatrix
phylogeny
phylogenetics
Mesquite
3.6 years ago by
molly77
▴ 10
1
vote
6
replies
1.3k
views
Append TPM value to sequence header in FASTA file
RNA-Seq
FASTA
TPM
TRANSCRIPTS
LINUX
updated 4.8 years ago by
JC
13k • written 4.8 years ago by
molly77
▴ 10
0
votes
1
reply
1.3k
views
Comment:
C: Append TPM value to sequence header in FASTA file
4.8 years ago by
molly77
▴ 10
0
votes
0
replies
811
views
tBLASTn - How do I turn all repetitive masking off??
RNA-Seq
blast
tblastn
Assembly
5.0 years ago by
molly77
▴ 10
0
votes
0
replies
3.9k
views
Comment:
C: tBLASTn - Warning: Could not calculate ungapped Karlin-Altschul parameters due t
5.0 years ago by
molly77
▴ 10
0
votes
2
replies
3.9k
views
tBLASTn - Warning: Could not calculate ungapped Karlin-Altschul parameters due to an invalid query sequence or its translation. Please verify the que…
blast
transcriptome
software error
alignment
5.0 years ago by
molly77
▴ 10
0
votes
10
replies
4.3k
views
Can I compare TPM values for a transcript across different transcriptome assemblies?
RNA-Seq
Gene expression
TPM
transcript
5.3 years ago by
molly77
▴ 10
0
votes
0
replies
4.3k
views
Comment:
C: Can I compare TPM values for a transcript across different transcriptome assembl
5.3 years ago by
molly77
▴ 10
0
votes
0
replies
1.5k
views
Comment:
C: Generate nucleotide multiple sequence alignment from protein alignment?
5.5 years ago by
molly77
▴ 10
0
votes
2
replies
1.5k
views
Generate nucleotide multiple sequence alignment from protein alignment?
multiple-sequence-alignment
updated 18 months ago by
Ram
44k • written 5.5 years ago by
molly77
▴ 10
2
votes
1
reply
1.7k
views
Best method to assemble low-abundance transcripts?
assembly
rna-seq
illumina
transcriptomics
updated 6.8 years ago by
Matteo Schiavinato
★ 3.6k • written 6.8 years ago by
molly77
▴ 10
0
votes
1
reply
1.5k
views
Why does my genome annotation file contain only one type of feature? (i.e. mol_type=genomic DNA)
gff
genome
annotation
7.1 years ago by
molly77
▴ 10
0
votes
1
reply
6.9k
views
Comment:
A: Get cds using bedtools
7.1 years ago by
molly77
▴ 10
0
votes
0
replies
6.9k
views
Comment:
C: Get cds using bedtools
7.1 years ago by
molly77
▴ 10
0
votes
1
reply
3.1k
views
Comment:
C: Program that will extract all CDS from protein-coding genes in a genome fasta fi
7.1 years ago by
molly77
▴ 10
0
votes
3
replies
3.1k
views
Program that will extract all CDS from protein-coding genes in a genome fasta file (with gff file)
genome
gene
CDS
updated 7.1 years ago by
Kevin Blighe
88k • written 7.1 years ago by
molly77
▴ 10
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