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MissingOutputException error in snakemake
snakemake
4.2 years ago by biplab ▴ 110
2
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1
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4.8k
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Answer: A: How to design qPCR primers to validate RNA-seq experiment?
6.4 years ago by biplab ▴ 110
2
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0
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2.8k
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Comment: C: How can I count read that falls into exon-intron and exon-exon junction?
6.6 years ago by biplab ▴ 110
8
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3
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2.8k
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How can I count read that falls into exon-intron and exon-exon junction?
RNA-Seq next-gen sequencing
updated 6.8 years ago by 36k • written 6.8 years ago by ▴ 110
3
votes
7
replies
4.1k
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How to calculate distribution of mapped read over classes of RNA?
RNA-Seq ChIP-Seq
updated 6.8 years ago by ▴ 270 • written 6.8 years ago by ▴ 110
0
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1
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4.1k
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Comment: C: How to calculate distribution of mapped read over classes of RNA?
6.8 years ago by biplab ▴ 110
0
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1
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4.1k
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Comment: C: How to calculate distribution of mapped read over classes of RNA?
updated 6.8 years ago by 149k • written 6.8 years ago by ▴ 110
1
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3
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4.5k
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Why IVG coverage track from bam and bigwig files looks different?
RNA-Seq alignment next-gen
updated 6.9 years ago by 15k • written 6.9 years ago by ▴ 110
0
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0
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4.5k
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Comment: C: Why IVG coverage track from bam and bigwig files looks different?
6.9 years ago by biplab ▴ 110
1
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1
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1.5k
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How can I use edgeR for comparing a lot of treatments with control with fewer lines of code to avoid error during contrasting?
RNA-Seq R
7.0 years ago by biplab ▴ 110
0
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1
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2.6k
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Answer: A: HISAT2 running pair end
7.1 years ago by biplab ▴ 110
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0
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1.1k
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Comment: C: Aligning read with non-genome encoded sequence
7.1 years ago by biplab ▴ 110
0
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1
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1.1k
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Comment: C: Aligning read with non-genome encoded sequence
7.1 years ago by biplab ▴ 110
2
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7
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1.1k
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Aligning read with non-genome encoded sequence
alignment rna-seq
updated 7.1 years ago by 105k • written 7.1 years ago by ▴ 110
0
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1
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1.1k
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Comment: C: Aligning read with non-genome encoded sequence
7.1 years ago by biplab ▴ 110
0
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0
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1.7k
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Comment: C: How can I count reads mapped to the ribosomal genes.
7.1 years ago by biplab ▴ 110
2
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2
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1.7k
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How can I count reads mapped to the ribosomal genes.
rna-seq next-gen alignment
7.1 years ago by biplab ▴ 110
0
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0
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1.5k
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Comment: C: How can I count reads aligned to features and extract poly-T stretch information
7.2 years ago by biplab ▴ 110
3
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2
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1.5k
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How can I count reads aligned to features and extract poly-T stretch information from the Read ID?
next-gen rna-seq
updated 7.2 years ago by 105k • written 7.2 years ago by ▴ 110
2
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1
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1.7k
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Answer: A: Alignment to ref genome
7.3 years ago by biplab ▴ 110
0
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0
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2.4k
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Comment: C: How can I extract annotation for genes from a GTF file that are more than 200 bp
7.4 years ago by biplab ▴ 110
3
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3
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2.4k
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How can I extract annotation for genes from a GTF file that are more than 200 bp apart from neighboring genes?
genome next-gen RNA-Seq
updated 7.4 years ago by 36k • written 7.4 years ago by ▴ 110
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