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Incorporating factors of unwanted variation from RUVr into EdgeR cell means model for DE
R EdgeR RUV RUVseq GLM
5.5 years ago by garbuzov ▴ 70
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Answer: A: 44% Successfully Assigned Fragments with featureCounts after 85% uniquely mapped
5.5 years ago by garbuzov ▴ 70
2
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4
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44% Successfully Assigned Fragments with featureCounts after 85% uniquely mapped reads with STAR
rna-seq alignment RNA-Seq featureCounts STAR
updated 6 months ago by ▴ 340 • written 5.5 years ago by ▴ 70
11
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8
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5.8k
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Multi-mapping High with featureCounts but not STAR
RNA-Seq sequencing alignment
updated 8 months ago by 147k • written 5.5 years ago by ▴ 70
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2.4k
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Comment: C: Using SRA Toolkit and Samtools to look at reads mapping to one region in public
7.1 years ago by garbuzov ▴ 70
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3
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2.4k
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Using SRA Toolkit and Samtools to look at reads mapping to one region in public database
ChIP-Seq sra alignment
7.1 years ago by garbuzov ▴ 70
6 results • Page 1 of 1
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