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899
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tool for calculate tumor-only sample purity of wgs or wes
next-gen genome
4.4 years ago by linouhao ▴ 10
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1.3k
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Comment: C: negative geo value analysis
4.6 years ago by linouhao ▴ 10
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14k
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Comment: C: series_matrix.txt in GEO are they always the normalized values?
4.6 years ago by linouhao ▴ 10
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1
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3.1k
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Comment: C: Noisy germline CNV data using CNVKit
updated 4.6 years ago by 12k • written 4.7 years ago by ▴ 10
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2
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1.3k
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negative geo value analysis
microarray
updated 4.6 years ago by 12k • written 4.6 years ago by ▴ 10
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1
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14k
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Comment: A: series_matrix.txt in GEO are they always the normalized values?
updated 4.6 years ago by 12k • written 4.6 years ago by ▴ 10
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1
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5.6k
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Comment: C: Single-color and two color Agilent array analyzing in R
4.6 years ago by linouhao ▴ 10
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4.2k
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Comment: C: Why some microarray data have negative value? How to fix it?
4.6 years ago by linouhao ▴ 10
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4.3k
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Comment: C: CNVkit - how many normal samples do I need for the pooled normal reference?
4.7 years ago by linouhao ▴ 10
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1.1k
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Comment: C: CNV callers for WES data
4.7 years ago by linouhao ▴ 10
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1.7k
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Comment: C: Noisy CNV background in old FFPE sample
4.7 years ago by linouhao ▴ 10
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1.4k
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Comment: A: cnvkit filtering low depth bins
4.7 years ago by linouhao ▴ 10
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3.3k
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Comment: C: How are the log2 values in CNVkit .cnr files calculated?
4.7 years ago by linouhao ▴ 10
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1.1k
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how should I filter call.cns results according to cn depth p_ttest probes weight
cnv
4.7 years ago by linouhao ▴ 10
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1.2k
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cnvkit suitable read depth , R version, reliable cutoff
cnvkit cnv
4.7 years ago by linouhao ▴ 10
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1
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13k
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Answer: A: Help with understanding CNVkit output
5.4 years ago by linouhao ▴ 10
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1
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1.5k
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Answer: A: Can CVNkit call CNV correctly at HLA genes region?
6.0 years ago by linouhao ▴ 10
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2
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5.5k
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Comment: A: bam_sort_core problem when bam files be processed by samtools
6.4 years ago by linouhao ▴ 10
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6.3k
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Comment: C: Why is normal blood used for matched tumor (instead of adjacent norm tissue)?
6.4 years ago by linouhao ▴ 10
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2.9k
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Comment: C: somatic variant calling with no germline sample
6.4 years ago by linouhao ▴ 10
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0
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2.9k
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Comment: C: somatic variant calling with no germline sample
6.4 years ago by linouhao ▴ 10
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2.0k
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Comment: C: CNV calling on tumor sample with no germline counterpart
6.4 years ago by linouhao ▴ 10
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0
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2.9k
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Comment: C: Best CNV caller for Illumina WGRS data, in order to compare two phenotypes
6.4 years ago by linouhao ▴ 10
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0
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14k
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Comment: C: Finding Variable Genes in Seurat, scRNA-seq
6.4 years ago by linouhao ▴ 10
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0
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14k
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Comment: C: Finding Variable Genes in Seurat, scRNA-seq
6.4 years ago by linouhao ▴ 10
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0
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13k
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Comment: C: Can EdgeR of DeSeq be used for Single-cell RNA-seq?
6.5 years ago by linouhao ▴ 10
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0
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3.5k
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Answer: A: How to adjust the position of chromosome or gene labels in OmicCircos
6.7 years ago by linouhao ▴ 10
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1
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54k
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
6.8 years ago by linouhao ▴ 10
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