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Comment: Comment: Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized
7 weeks ago by Joe Kherery ▴ 140
2
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3
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485
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Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized RNA-Seq Data
dese2 cbioportal RNA-seq limma
updated 7 weeks ago by 101k • written 8 weeks ago by ▴ 140
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185
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Uncertainty on Which Data to Use for Alpha Diversity Analysis (Shannon)
Iteration Shannon Rarefaction Boxplot Alpha
8 weeks ago by Joe Kherery ▴ 140
5
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2
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348
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How to Handle Unbalanced RNA-seq Data (710 vs. 15 Samples) Using DESeq2?
R DESeq2 Unbalanced RNA-seq groups
updated 12 weeks ago by ★ 1.8k • written 12 weeks ago by ▴ 140
6
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16
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3.4k
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R: Collapsed to unique genes (Affymetrix microarray)
r microarray Affymetrix
5.0 years ago by Joe Kherery ▴ 140
0
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0
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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1
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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0
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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2
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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1
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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1
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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1
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3.4k
views
Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
1
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1
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
0
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1
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3.4k
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Comment: C: R: Collapsed to unique genes (Affymetrix microarray)
5.0 years ago by Joe Kherery ▴ 140
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0
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3.1k
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Comment: C: gene expression with .txt file
5.1 years ago by Joe Kherery ▴ 140
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1
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3.1k
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Comment: C: gene expression with .txt file
5.1 years ago by Joe Kherery ▴ 140
0
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1
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3.1k
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Comment: C: gene expression with .txt file
5.1 years ago by Joe Kherery ▴ 140
0
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1
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3.1k
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Comment: C: gene expression with .txt file
5.1 years ago by Joe Kherery ▴ 140
0
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1
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3.1k
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Comment: C: gene expression with .txt file
5.1 years ago by Joe Kherery ▴ 140
5
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9
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3.1k
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gene expression with .txt file
R gene TXT
5.1 years ago by Joe Kherery ▴ 140
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0
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1.0k
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Comment: C: How to predict the cellular origin of expression of a gene in a blood sample?
6.5 years ago by Joe Kherery ▴ 140
2
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2
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1.0k
views
How to predict the cellular origin of expression of a gene in a blood sample?
microarray in silico
updated 6.5 years ago by 13k • written 6.5 years ago by ▴ 140
7
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9
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3.5k
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MicroRNA-target interactions databases
microRNA Target Interaction
updated 6.5 years ago by ▴ 110 • written 6.5 years ago by ▴ 140
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0
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3.5k
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Comment: C: MicroRNA-target interactions databases
6.5 years ago by Joe Kherery ▴ 140
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1
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3.5k
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Comment: C: MicroRNA-target interactions databases
6.5 years ago by Joe Kherery ▴ 140
6
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1
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5.4k
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Differences between lfc=log2(1.5) and lcf=1.5
r limma microarray
updated 6.5 years ago by 35k • written 6.5 years ago by ▴ 140
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0
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1.3k
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Comment: C: Same code for different versions of the same platform
6.5 years ago by Joe Kherery ▴ 140
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1
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1.3k
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Comment: C: Same code for different versions of the same platform
6.5 years ago by Joe Kherery ▴ 140
1
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5
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1.3k
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Same code for different versions of the same platform
R microarray
6.5 years ago by Joe Kherery ▴ 140
0
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0
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2.0k
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Comment: C: Functional enrichment of pathways
6.5 years ago by Joe Kherery ▴ 140
0
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1
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2.0k
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Comment: C: Functional enrichment of pathways
6.5 years ago by Joe Kherery ▴ 140
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1
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2.0k
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Comment: C: Functional enrichment of pathways
6.5 years ago by Joe Kherery ▴ 140
0
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1
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2.0k
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Comment: C: Functional enrichment of pathways
6.5 years ago by Joe Kherery ▴ 140
3
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10
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2.0k
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Functional enrichment of pathways
enriched pathways
6.5 years ago by Joe Kherery ▴ 140
0
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0
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3.1k
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Comment: C: Duplicate genes/different probes in micorray analyzes
6.6 years ago by Joe Kherery ▴ 140
3
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4
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3.1k
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Duplicate genes/different probes in micorray analyzes
microarray genes duplicate
updated 6.6 years ago by 35k • written 6.6 years ago by ▴ 140
0
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0
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3.1k
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Comment: C: Duplicate genes/different probes in micorray analyzes
6.6 years ago by Joe Kherery ▴ 140
42
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13
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46k
views
8 follow
Difference between FC and LogFC
r microarray
updated 2.9 years ago by • 0 • written 6.6 years ago by ▴ 140
0
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0
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46k
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Comment: C: Difference between FC and LogFC
6.6 years ago by Joe Kherery ▴ 140
0
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0
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46k
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Comment: C: Difference between FC and LogFC
6.6 years ago by Joe Kherery ▴ 140
0
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0
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46k
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Comment: C: Difference between FC and LogFC
6.6 years ago by Joe Kherery ▴ 140
0
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0
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46k
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Comment: C: Difference between FC and LogFC
6.6 years ago by Joe Kherery ▴ 140
0
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0
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1.5k
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Comment: C: txt normalized in r
6.8 years ago by Joe Kherery ▴ 140
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1
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1.5k
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Comment: C: txt normalized in r
6.8 years ago by Joe Kherery ▴ 140
0
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1
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1.5k
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Comment: C: txt normalized in r
6.8 years ago by Joe Kherery ▴ 140
4
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8
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1.5k
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txt normalized in r
txt normalized in r R array
6.8 years ago by Joe Kherery ▴ 140
0
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1
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1.5k
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Comment: A: txt normalized in r
6.8 years ago by Joe Kherery ▴ 140
0
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1
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1.1k
views
Comment: C: R x commercial softwares for microarray analyzes
7.0 years ago by Joe Kherery ▴ 140
0
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3
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1.1k
views
R x commercial softwares for microarray analyzes
R microarray analyzes LIMMA
7.0 years ago by Joe Kherery ▴ 140
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