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8
votes
3
replies
40k
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Answer: A: How To Get Number Of Reads In Bam File Efficiently In Python?
updated 6.2 years ago by 44k • written 13.2 years ago by ▴ 900
0
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2
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3.9k
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Answer: A: Can'T Extract Information From Bam File
12.0 years ago by Marvin ▴ 900
1
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1
reply
6.1k
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Answer: A: Reducing I/O Burden Of Bamtools C++ Api
12.0 years ago by Marvin ▴ 900
0
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0
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3.6k
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Comment: C: Merge Bam With Vcf Files. Tips About The Correct Workflow
12.0 years ago by Marvin ▴ 900
1
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1
reply
3.6k
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Answer: A: Merge Bam With Vcf Files. Tips About The Correct Workflow
12.0 years ago by Marvin ▴ 900
2
votes
0
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19k
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Answer: A: Final Solution For "Mapq Should Be 0 For Unmapped Read."
12.1 years ago by Marvin ▴ 900
2
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0
replies
8.2k
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Comment: C: Reference File From Bam
12.1 years ago by Marvin ▴ 900
0
votes
0
replies
11k
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Comment: C: Clarification For Running Bwa In Parallel‏
12.6 years ago by Marvin ▴ 900
1
vote
2
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13k
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Answer: A: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Marvin ▴ 900
8
votes
2
replies
50k
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Answer: Answer: Fastq Splitter For Paired End Reads
updated 3.6 years ago by 44k • written 12.6 years ago by ▴ 900
0
votes
0
replies
14k
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Comment: C: Should We Attempt To Redefine The Cigar String In Sam/Bam Format?
12.8 years ago by Marvin ▴ 900
1
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0
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9.7k
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Answer: A: What Does Bwa'S '-N' Parameter Mean?
12.9 years ago by Marvin ▴ 900
0
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0
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9.7k
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Comment: C: What Does Bwa'S '-N' Parameter Mean?
12.9 years ago by Marvin ▴ 900
3
votes
0
replies
80k
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Answer: A: Merging Bam Files
12.9 years ago by Marvin ▴ 900
0
votes
1
reply
5.0k
views
Comment: C: Couchdb (Or Similar) For Annotations, Alignments, Etc.
12.9 years ago by Marvin ▴ 900
0
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0
replies
5.0k
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Comment: C: Couchdb (Or Similar) For Annotations, Alignments, Etc.
12.9 years ago by Marvin ▴ 900
0
votes
0
replies
5.0k
views
Comment: C: Couchdb (Or Similar) For Annotations, Alignments, Etc.
12.9 years ago by Marvin ▴ 900
37
votes
22
replies
5.0k
views
9 follow
Couchdb (Or Similar) For Annotations, Alignments, Etc.
database annotation
updated 12.9 years ago by ▴ 60 • written 12.9 years ago by ▴ 900
2
votes
2
replies
3.0k
views
Answer: A: Is There An Implementation Of Dnabit Compress Algorithm?
12.9 years ago by Marvin ▴ 900
1
vote
0
replies
7.3k
views
Comment: C: Getting 'Samtools View' To Work On Multiple Bamfiles Simultaneously
12.9 years ago by Marvin ▴ 900
7
votes
0
replies
14k
views
Answer: A: Bam : Extract Only Alignment With A Specific Length
13.1 years ago by Marvin ▴ 900
0
votes
0
replies
13k
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Comment: C: What Is The Most Direct Way To Extract The Splice Junctions From A Sam File?
13.2 years ago by Marvin ▴ 900
1
vote
0
replies
13k
views
Answer: A: Compare Two Fasta Files By Headers
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
13k
views
Comment: C: Genotype Likelihood Calculation In Samtools Is Wrong?
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
13k
views
Comment: C: Genotype Likelihood Calculation In Samtools Is Wrong?
13.2 years ago by Marvin ▴ 900
18
votes
10
replies
13k
views
Genotype Likelihood Calculation In Samtools Is Wrong?
samtools genotyping
updated 2.8 years ago by 44k • written 13.2 years ago by ▴ 900
1
vote
0
replies
13k
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Comment: C: Genotype Likelihood Calculation In Samtools Is Wrong?
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
4.8k
views
Comment: C: When Reviewing A Software Paper, Do You Talk About The Code Quality?
13.2 years ago by Marvin ▴ 900
2
votes
2
replies
4.8k
views
Answer: A: When Reviewing A Software Paper, Do You Talk About The Code Quality?
13.2 years ago by Marvin ▴ 900
5
votes
1
reply
93k
views
Answer: A: What Does Samtools Flagstat Results Mean?
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
7.8k
views
Comment: C: How Common Are Multi-Line Fastq Files?
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
18k
views
Comment: C: Can I Access Bam File Information Without Converting To Sam?
13.2 years ago by Marvin ▴ 900
0
votes
0
replies
18k
views
Answer: A: Can I Access Bam File Information Without Converting To Sam?
13.2 years ago by Marvin ▴ 900
4
votes
0
replies
7.9k
views
Answer: A: Bam Format: What'S The Purpose Of Rnext And Pnext ?
13.2 years ago by Marvin ▴ 900
2
votes
0
replies
13k
views
Answer: A: Guessing The Quality Scale In Fastq Files
13.3 years ago by Marvin ▴ 900
3
votes
0
replies
63k
views
Answer: A: How To Efficiently Parse A Huge Fastq File?
13.3 years ago by Marvin ▴ 900
4
votes
1
reply
9.3k
views
Answer: A: Picking A Programming Language And Where To Begin
13.3 years ago by Marvin ▴ 900
0
votes
0
replies
5.8k
views
Answer: A: What Does This Cigar Mean?
13.3 years ago by Marvin ▴ 900
1
vote
0
replies
37k
views
Comment: C: Split Fastq Files Into Chunks Of 1M Reads
13.3 years ago by Marvin ▴ 900
8
votes
0
replies
37k
views
Answer: Answer: Split Fastq Files Into Chunks Of 1M Reads
updated 3.3 years ago by 44k • written 13.3 years ago by ▴ 900
0
votes
0
replies
5.5k
views
Comment: C: Why Did Samtools Rmdup Find So Many Duplicates In My Data?
13.4 years ago by Marvin ▴ 900
0
votes
0
replies
4.5k
views
Answer: A: Error While Running Samse (Bwa)
13.4 years ago by Marvin ▴ 900
42 results • Page 1 of 1
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