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Comment: C: Is there a way to compare single-cell RNA seq and Ribotag-seq?
5.6 years ago by John ▴ 270
0
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1.9k
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Comment: C: Is there a way to compare single-cell RNA seq and Ribotag-seq?
5.6 years ago by John ▴ 270
0
votes
0
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954
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Comment: C: How much importance is RNAseq experimental bias?
5.6 years ago by John ▴ 270
0
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1
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1.9k
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Comment: C: Is there a way to compare single-cell RNA seq and Ribotag-seq?
5.6 years ago by John ▴ 270
1
vote
5
replies
954
views
How much importance is RNAseq experimental bias?
RNA-Seq rna-seq sequence sequencing alignment
updated 5.6 years ago by 104k • written 5.6 years ago by ▴ 270
2
votes
10
replies
1.9k
views
Is there a way to compare single-cell RNA seq and Ribotag-seq?
RNA-Seq rna-seq next-gen sequencing gene
5.6 years ago by John ▴ 270
0
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1
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1.7k
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how to run RSEM with more paired end fastq files?
RNA-Seq rna-seq sequencing R
updated 5.7 years ago by 35k • written 5.7 years ago by ▴ 270
16
votes
8
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5.9k
views
How to combine multiple data files by column names?
RNA-Seq rna-seq R
updated 5.7 years ago by 12k • written 5.7 years ago by ▴ 270
1
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0
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5.9k
views
Comment: C: How to combine multiple data files by column names?
5.7 years ago by John ▴ 270
0
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0
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1.6k
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Comment: C: How to find cumulative gene score for gene list?
5.7 years ago by John ▴ 270
0
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1
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1.6k
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Comment: C: How to find cumulative gene score for gene list?
5.7 years ago by John ▴ 270
0
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1
reply
1.6k
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Comment: C: How to find cumulative gene score for gene list?
5.7 years ago by John ▴ 270
0
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1
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3.8k
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Comment: C: How to perform Gene Set Enrichment Analysis for multiple treatments?
5.7 years ago by John ▴ 270
2
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3
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3.8k
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How to perform Gene Set Enrichment Analysis for multiple treatments?
RNA-Seq rna-seq R next-gen sequencing
5.7 years ago by John ▴ 270
3
votes
6
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1.6k
views
How to find cumulative gene score for gene list?
RNA-Seq rna-seq R sequencing gene
5.7 years ago by John ▴ 270
4
votes
5
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6.9k
views
How to find differentially expressed genes between three groups?
RNA-Seq rna-seq ngs r R
updated 5.7 years ago by ▴ 70 • written 5.7 years ago by ▴ 270
0
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0
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2.3k
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Comment: C: How can I show the group of gene's expression across Samples?
5.7 years ago by John ▴ 270
2
votes
2
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2.3k
views
How can I show the group of gene's expression across Samples?
sequencing RNA-Seq r rna-seq
5.7 years ago by John ▴ 270
1
vote
1
reply
2.9k
views
Error: reduced dimension space doesn't match the dimension of the CellDataSet object?
RNA-Seq sequence R software error next-gen
updated 6.2 years ago by 20 • written 6.7 years ago by ▴ 270
2
votes
4
replies
4.4k
views
what is residualModelFormulaStr in monocle?
r R RNA-Seq software error monocle
updated 6.5 years ago by ▴ 290 • written 6.7 years ago by ▴ 270
9
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4
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1.7k
views
How to determine the number of clusters in heirarchical clustering?
R RNA-Seq rna-seq
updated 6.6 years ago by 20 • written 6.7 years ago by ▴ 270
0
votes
1
reply
843
views
How to check how many gene ontology terms sourced from manually curated versus electronic annotations?
RNA-Seq rna-seq r R
updated 6.6 years ago by 27k • written 6.6 years ago by ▴ 270
0
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2
replies
1.6k
views
How to rank differentially expressed genes (output from EBSeq)?
R RNA-Seq rna-seq
6.7 years ago by John ▴ 270
0
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0
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1.3k
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Comment: C: How many samples suggested to perform differential gene expression analysis?
6.7 years ago by John ▴ 270
0
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0
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1.3k
views
Comment: C: How many samples suggested to perform differential gene expression analysis?
6.7 years ago by John ▴ 270
1
vote
4
replies
1.3k
views
How many samples suggested to perform differential gene expression analysis?
RNA-Seq rna-seq r R
updated 6.7 years ago by ▴ 30 • written 6.7 years ago by ▴ 270
0
votes
0
replies
3.2k
views
Comment: C: How to perform gene ontology analysis with list of upregulated and down regulate
6.7 years ago by John ▴ 270
5
votes
6
replies
3.2k
views
How to perform gene ontology analysis with list of upregulated and down regulated genes?
RNA-Seq rna-seq r
updated 6.7 years ago by ▴ 40 • written 6.7 years ago by ▴ 270
0
votes
0
replies
3.2k
views
Comment: C: How to perform gene ontology analysis with list of upregulated and down regulate
6.7 years ago by John ▴ 270
0
votes
0
replies
3.2k
views
Comment: C: How to perform gene ontology analysis with list of upregulated and down regulate
6.7 years ago by John ▴ 270
0
votes
0
replies
1.5k
views
Comment: C: How to delete the cells belongs to particlar CellType in R?
6.7 years ago by John ▴ 270
0
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1
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1.5k
views
Comment: C: How to delete the cells belongs to particlar CellType in R?
6.7 years ago by John ▴ 270
3
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4
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1.5k
views
How to delete the cells belongs to particlar CellType in R?
RNA-Seq R r software error
updated 6.7 years ago by 27k • written 6.7 years ago by ▴ 270
2
votes
1
reply
2.4k
views
How to fix (find) number of dimensions while reducing dimensions in tSNE method?
RNA-Seq tsne pca rna-seq R
6.7 years ago by John ▴ 270
0
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0
replies
876
views
which algorithm used in classifyCells() function in Monocle?
RNA-Seq R rna-seq sequencing
6.7 years ago by John ▴ 270
0
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0
replies
3.9k
views
ERR: Perplexity is too large in Reducedimension step in Monocle
RNA-Seq r R software error
6.7 years ago by John ▴ 270
0
votes
0
replies
24k
views
Comment: C: how to sum up the columns to remove the duplicated row names in RSEM output?
6.7 years ago by John ▴ 270
7
votes
4
replies
24k
views
how to sum up the columns to remove the duplicated row names in RSEM output?
R RNA-Seq
updated 6.7 years ago by 11k • written 6.7 years ago by ▴ 270
0
votes
0
replies
12k
views
Comment: C: How to overcome "duplicate row.names" error while importing tpm/count/fpkm matri
6.7 years ago by John ▴ 270
0
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1
reply
12k
views
Comment: C: How to overcome "duplicate row.names" error while importing tpm/count/fpkm matri
6.7 years ago by John ▴ 270
3
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6
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12k
views
How to overcome "duplicate row.names" error while importing tpm/count/fpkm matrix/table in R ?
R software error rna-seq RNA-Seq
updated 6.7 years ago by 6.6k • written 6.7 years ago by ▴ 270
0
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1
reply
2.1k
views
How to cluster single cell data using list of markers?
RNA-Seq r rna-seq R
6.7 years ago by John ▴ 270
0
votes
0
replies
998
views
How to find how many SRA bacterial transcriptome sequences are there in NCBI data base?
RNA-Seq
6.8 years ago by John ▴ 270
1
vote
3
replies
3.0k
views
There is no gene information in RSEM output
rsem RNA-Seq rna-seq
updated 6.8 years ago by 27k • written 6.8 years ago by ▴ 270
0
votes
0
replies
3.0k
views
Comment: C: There is no gene information in RSEM output
6.8 years ago by John ▴ 270
2
votes
1
reply
5.6k
views
How to get --transcript-to-gene-map <file> in RSEM?
rsem RNA-Seq reference index transcriptome
6.8 years ago by John ▴ 270
0
votes
0
replies
1.6k
views
Subgrouping SIngle Cell in RNA-Seq Data Analysis
RNA-Seq rna-seq clustering singlecell
6.8 years ago by John ▴ 270
0
votes
1
reply
2.0k
views
Comment: C: Alternative for unsupervised clustering in scRNA Data
6.8 years ago by John ▴ 270
1
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3
replies
2.0k
views
Alternative for unsupervised clustering in scRNA Data
RNA-Seq unsupervised clustering gene expression
6.8 years ago by John ▴ 270
0
votes
0
replies
6.1k
views
Comment: C: converting paired end reads to single end, is this a good idea?
6.9 years ago by John ▴ 270
125 results • Page 2 of 3
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