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543
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Microbiome / metagenomics databases
microbiome database metagenomics
2.6 years ago by erwan.scaon ▴ 960
0
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1
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110k
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Comment: Comment: Number of mapped reads from BAM file
2.6 years ago by erwan.scaon ▴ 960
0
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0
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617
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Enterotypes - Get raw data from E. Le Chatelier et al., 2013
Enterotypes MGnify
updated 2.2 years ago by 45k • written 3.0 years ago by ▴ 960
2
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1
reply
2.1k
views
Answer: Answer: How to select rows in a column and add a zero to selected rows
3.4 years ago by erwan.scaon ▴ 960
2
votes
4
replies
6.3k
views
blast culling_limit option behavior
blastn alignment culling_limit
updated 3.7 years ago by ▴ 20 • written 8.6 years ago by ▴ 960
0
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0
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1.2k
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
4.9 years ago by erwan.scaon ▴ 960
0
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1
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1.2k
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
4.9 years ago by erwan.scaon ▴ 960
0
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4
replies
1.2k
views
Extract all seqs bewteen two seqs ID in Fastq
fastq awk sed
updated 4.9 years ago by 166k • written 4.9 years ago by ▴ 960
2
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1
reply
2.2k
views
Answer: A: Algorithm based differences between Mutect2 and Haplotypecaller?
5.9 years ago by erwan.scaon ▴ 960
1
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0
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14k
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Answer: A: Genome assembly statistical tools
5.9 years ago by erwan.scaon ▴ 960
0
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4
replies
3.1k
views
Diffbind error : sequences from an unspecified genome; no seqlengths
Diffbind MACS2 GRanges MACS ChIP-Seq
updated 5.9 years ago by • 0 • written 7.2 years ago by ▴ 960
1
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0
replies
4.3k
views
Answer: A: choose between normalization techniques for OTU counts
6.2 years ago by erwan.scaon ▴ 960
0
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1
reply
2.8k
views
Answer: A: DESEQ2 size factors change when number of samples change in the design
6.6 years ago by erwan.scaon ▴ 960
0
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0
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1.1k
views
Find the closest Salmonella complete genome (starting with a NGS sample from a single Salmonella strain)
salmonella strainseeker snippy
6.6 years ago by erwan.scaon ▴ 960
0
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0
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3.5k
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Comment: C: strandness of paired-end data
6.7 years ago by erwan.scaon ▴ 960
0
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0
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4.0k
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Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
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0
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4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
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1
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4.0k
views
Answer: A: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
3
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20
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4.0k
views
edirect esearch : exclude given accessions
edirect esearch ncbi
6.7 years ago by erwan.scaon ▴ 960
0
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1
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4.0k
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Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
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1
reply
4.0k
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Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
0
replies
4.0k
views
Comment: C: edirect esearch : exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
0
replies
4.0k
views
Comment: C: Edirect esearch exclude given accessions
6.7 years ago by erwan.scaon ▴ 960
0
votes
1
reply
110k
views
Comment: C: Number of mapped reads from BAM file
6.8 years ago by erwan.scaon ▴ 960
0
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0
replies
11k
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Answer: A: Fasta file filtering
7.0 years ago by erwan.scaon ▴ 960
1
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0
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3.7k
views
Comment: C: Parsing Blast output on linux/unix
7.0 years ago by erwan.scaon ▴ 960
0
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1
reply
9.0k
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Comment: C: Kallisto TPM values
7.0 years ago by erwan.scaon ▴ 960
0
votes
1
reply
2.3k
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Comment: C: Search only plasmids from NT database using local BLAST
7.0 years ago by erwan.scaon ▴ 960
1
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1
reply
2.3k
views
Comment: C: Search only plasmids from NT database using local BLAST
7.0 years ago by erwan.scaon ▴ 960
2
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0
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3.7k
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Comment: C: Identifying CNVs from targeted amplicon sequencing
7.1 years ago by erwan.scaon ▴ 960
0
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1
reply
9.0k
views
Comment: C: Kallisto TPM values
7.1 years ago by erwan.scaon ▴ 960
1
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1
reply
1.6k
views
Comment: C: Please suggest your idea for variant calling analysis of many BAM files from who
7.1 years ago by erwan.scaon ▴ 960
0
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0
replies
6.9k
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Comment: A: STAR options for RNA Seq
7.1 years ago by erwan.scaon ▴ 960
0
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1
reply
3.2k
views
Comment: C: How to make a custom gtf or gff3 file with a list containing transcript loci
7.1 years ago by erwan.scaon ▴ 960
0
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0
replies
2.8k
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Comment: C: extracting sequence from fast file
7.1 years ago by erwan.scaon ▴ 960
0
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0
replies
1.9k
views
Comment: C: How to convert a LONG list of Genbank accession numbers for mRNA variants to a l
7.2 years ago by erwan.scaon ▴ 960
2
votes
0
replies
27k
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Comment: C: Is there a tool that sorts gtf files?
7.2 years ago by erwan.scaon ▴ 960
2
votes
1
reply
27k
views
Comment: C: Is there a tool that sorts gtf files?
7.2 years ago by erwan.scaon ▴ 960
7
votes
3
replies
27k
views
Answer: A: Is there a tool that sorts gtf files?
7.2 years ago by erwan.scaon ▴ 960
1
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1
reply
5.3k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
0
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0
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5.3k
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Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.3k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.3k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
11
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28
replies
5.3k
views
ChIP-Seq samples : FASTQ quality control
ChIP-Seq QC
7.2 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.3k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.3k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.2 years ago by erwan.scaon ▴ 960
100 results • Page 1 of 2
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