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Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
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4.5k
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Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
0
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1
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4.5k
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Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
0
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1
reply
4.5k
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Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
0
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0
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4.5k
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Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
0
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1
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4.5k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.7 years ago by erwan.scaon ▴ 950
0
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1
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4.5k
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Comment: C: ChIP-Seq samples : FASTQ quality control
updated 6.7 years ago by 147k • written 6.7 years ago by ▴ 950
1
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1
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6.0k
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Comment: C: RefSeq ID to TaxID?
6.7 years ago by erwan.scaon ▴ 950
0
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0
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2.8k
views
Comment: C: Diffbind error : sequences from an unspecified genome; no seqlengths
6.7 years ago by erwan.scaon ▴ 950
0
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0
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2.6k
views
Comment: C: IGV - is there a way to extract bulk information?
6.7 years ago by erwan.scaon ▴ 950
0
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1
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5.3k
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Comment: C: Pipeline for hybrid genome assembly of long and short reads AND how to deal with
6.7 years ago by erwan.scaon ▴ 950
1
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1
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6.9k
views
Answer: A: parsing vcf file
6.8 years ago by erwan.scaon ▴ 950
0
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0
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2.7k
views
Comment: C: Refseq human reference transcriptome link for RNA-seq differential expression an
6.8 years ago by erwan.scaon ▴ 950
1
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1
reply
3.9k
views
Comment: C: Kallisto read count processed does not tally
6.8 years ago by erwan.scaon ▴ 950
1
vote
1
reply
4.1k
views
Comment: C: CosmicCodingMuts.vcf.gz for hg38?
6.8 years ago by erwan.scaon ▴ 950
0
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0
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4.6k
views
Comment: C: Saving IGV images for bigwig files
6.8 years ago by erwan.scaon ▴ 950
3
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1
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5.4k
views
Answer: A: how to annotate RNA-seq
6.8 years ago by erwan.scaon ▴ 950
5
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0
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10k
views
Answer: A: How to convert gff file to a csv file
6.9 years ago by erwan.scaon ▴ 950
2
votes
0
replies
14k
views
Answer: A: biomaRt mmusculus_gene_ensembl dataset
6.9 years ago by erwan.scaon ▴ 950
0
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1
reply
14k
views
Comment: C: biomaRt mmusculus_gene_ensembl dataset
6.9 years ago by erwan.scaon ▴ 950
0
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1
reply
1.3k
views
Comment: C: Balanced, nonredundant set of bacterial genomes
7.0 years ago by erwan.scaon ▴ 950
0
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1
reply
2.5k
views
Trying to map informations between two Mus musculus strains with biomaRt external_gene_name field
biomaRt 129S1/SvImJ external_gene_name ensembl
updated 7.0 years ago by ★ 2.1k • written 7.0 years ago by ▴ 950
30
votes
1
reply
18k
views
Read pair orientation : Illumina TruSeq Stranded mRNA library
featureCounts TruSeq strandSpecific
updated 7.0 years ago by 13k • written 7.0 years ago by ▴ 950
0
votes
6
replies
2.5k
views
Looking for a thorough annotation for non-primary assembly units in GRCm38
GRCm38 mus musculus GTF GFF GENCODE
7.0 years ago by erwan.scaon ▴ 950
0
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0
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2.5k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.0 years ago by erwan.scaon ▴ 950
0
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1
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2.5k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.0 years ago by erwan.scaon ▴ 950
0
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1
reply
2.5k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.0 years ago by erwan.scaon ▴ 950
3
votes
1
reply
3.2k
views
Answer: A: Discrepancy between abundance.tsv and tx2gene.csv
7.0 years ago by erwan.scaon ▴ 950
2
votes
0
replies
1.9k
views
Answer: A: Tools for Copy Number Variation analysis from ion Proton data.
7.0 years ago by erwan.scaon ▴ 950
0
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1
reply
1.9k
views
Comment: C: local blastn against one subgroup of species
7.0 years ago by erwan.scaon ▴ 950
0
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1
reply
5.4k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
0
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1
reply
5.4k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
1
vote
1
reply
5.4k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
0
votes
1
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5.4k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
0
votes
1
reply
5.4k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
0
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0
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5.4k
views
Answer: A: Trying to match Accession numbers to Taxonomy IDs
7.1 years ago by erwan.scaon ▴ 950
0
votes
0
replies
15k
views
Comment: C: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
7.2 years ago by erwan.scaon ▴ 950
0
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0
replies
7.7k
views
Comment: C: Obtain full taxonomic hierarchy from multiple species names
7.2 years ago by erwan.scaon ▴ 950
1
vote
0
replies
4.6k
views
Comment: C: STAR mapper: unrecoginzed parameter name "sjdbInsertSave" in input "genomeParame
7.3 years ago by erwan.scaon ▴ 950
0
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1
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4.6k
views
Answer: A: STAR mapper: unrecoginzed parameter name "sjdbInsertSave" in input "genomeParame
7.3 years ago by erwan.scaon ▴ 950
2
votes
1
reply
4.7k
views
Answer: A: Retrieve genbank viral genomes
7.4 years ago by erwan.scaon ▴ 950
12
votes
4
replies
4.7k
views
Retrieve genbank viral genomes
ncbi genbank viral-genome
updated 20 months ago by 44k • written 7.4 years ago by ▴ 950
18
votes
6
replies
10k
views
COSMIC vcf file compatibility for Mutect2
GATK Mutect2 COSMIC VCF
7.6 years ago by erwan.scaon ▴ 950
5
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0
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10k
views
Answer: A: COSMIC vcf file compatibility for Mutect2
7.6 years ago by erwan.scaon ▴ 950
0
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0
replies
5.7k
views
Answer: A: GATK BaseRecalibrator - Input files knownSites and reference have incompatible c
7.8 years ago by erwan.scaon ▴ 950
8
votes
4
replies
10k
views
Answer: A: COSMIC vcf file compatibility for Mutect2
7.8 years ago by erwan.scaon ▴ 950
0
votes
0
replies
5.9k
views
Comment: A: blast culling_limit option behavior
8.0 years ago by erwan.scaon ▴ 950
5
votes
3
replies
6.3k
views
Quality control for Ion Torrent
sequencing
updated 8.0 years ago by 9.8k • written 8.0 years ago by ▴ 950
1
vote
0
replies
7.5k
views
Answer: A: Tools For De Novo Assembly For Exome Sequencing Data
12.1 years ago by erwan.scaon ▴ 950
3
votes
1
reply
7.3k
views
Answer: A: Existing Tools For Building A De Bruijn Graph From Raw Reads
12.4 years ago by erwan.scaon ▴ 950
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