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Are reference sequences from GENCODE, Ensembl and RefSeq the same if they are called GRCh38.p10, it is just the annotation that varies?
RNA-Seq reference genome annotations GRCh38
6.8 years ago by amina.mcdiarmid ▴ 10
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Comment: C: hg38 annotation file (gtf) UCSC format
6.8 years ago by amina.mcdiarmid ▴ 10
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Comment: C: Homo_sapiens.GRCh38.91.chr.gtf.gz or Homo_sapiens.GRCh38.91.gtf.gz for different
6.8 years ago by amina.mcdiarmid ▴ 10
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Homo_sapiens.GRCh38.91.chr.gtf.gz or Homo_sapiens.GRCh38.91.gtf.gz for differential expression of RNA-seq data?
RNA-Seq ensembl genome annotation
updated 6.8 years ago by 104k • written 6.8 years ago by ▴ 10
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Comment: C: Difference between GTF file with CHR and without CHR. ENSEMBL
6.8 years ago by amina.mcdiarmid ▴ 10
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