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Comment: Comment: Associating VDJ clonotyping data with scRNA-seq in Seurat
11 weeks ago by garcesj ▴ 50
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0
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1.7k
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Answer: Answer: Error in .Call2("C_solve_user_SEW", refwidths, start, end, width, translate.nega
5 months ago by garcesj ▴ 50
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0
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1.9k
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Comment: Comment: How to call CNV without normal samples
8 months ago by garcesj ▴ 50
0
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0
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43k
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Comment: Comment: Generating consensus sequence from bam file
9 months ago by garcesj ▴ 50
0
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0
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911
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Comment: Comment: Mutation counts corrected by number of samples
12 months ago by garcesj ▴ 50
0
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1
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911
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Comment: Comment: Mutation counts corrected by number of samples
12 months ago by garcesj ▴ 50
0
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4
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911
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Mutation counts corrected by number of samples
mutations WES genomics WGS
12 months ago by garcesj ▴ 50
0
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0
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617
views
How to create a haplotype map?
picard haplotype CrosscheckFingerprints
updated 2.0 years ago by 45k • written 2.0 years ago by ▴ 50
3
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6
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3.0k
views
Mutect2 is not detecting all available cores (multithreading)
exomes parallelization mutect2
updated 16 months ago by ▴ 30 • written 2.5 years ago by ▴ 50
3
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1
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3.0k
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Answer: Answer: Mutect2 is not detecting all available cores (multithreading)
2.4 years ago by garcesj ▴ 50
0
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1
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3.0k
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Comment: Comment: Mutect2 is not detecting all available cores (multithreading)
2.4 years ago by garcesj ▴ 50
1
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3
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1.8k
views
BCL compression
compression demultiplexing illumina BCL
updated 2.7 years ago by 102k • written 2.7 years ago by ▴ 50
0
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1
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2.2k
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Comment: Comment: Low mapping rate due to rRNA
3.0 years ago by garcesj ▴ 50
4
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6
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2.2k
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Low mapping rate due to rRNA
RNA-seq rRNA STAR
updated 3.0 years ago by ★ 1.9k • written 3.0 years ago by ▴ 50
0
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0
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2.2k
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Comment: Comment: Low mapping rate due to rRNA
3.0 years ago by garcesj ▴ 50
0
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0
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1.3k
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Comment: Comment: Combine full-length and 3` RNAseq, is it possible?
3.2 years ago by garcesj ▴ 50
0
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0
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897
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Comment: Comment: Study of similarity (contrary to differential expression analysis)
3.3 years ago by garcesj ▴ 50
2
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2
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897
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Study of similarity (contrary to differential expression analysis)
RNAseq expression analysis differential correlation
3.3 years ago by garcesj ▴ 50
3
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4
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1.3k
views
Combine full-length and 3` RNAseq, is it possible?
ExperimentalDesign RNAseq
3.2 years ago by garcesj ▴ 50
0
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5
replies
2.6k
views
Weird volcano plot
RNA-Seq volcano
updated 4.4 years ago by 20 • written 4.5 years ago by ▴ 50
0
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0
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2.6k
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Comment: C: Weird volcano plot
4.5 years ago by garcesj ▴ 50
0
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1
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2.6k
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Comment: C: Weird volcano plot
4.5 years ago by garcesj ▴ 50
0
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0
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4.5k
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Answer: A: clusterProfiler::enrichGO() is getting very slow
4.9 years ago by garcesj ▴ 50
0
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0
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3.6k
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Comment: C: Weird MA-plot (DESeq2)
5.2 years ago by garcesj ▴ 50
1
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1
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3.6k
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Comment: C: Weird MA-plot (DESeq2)
5.2 years ago by garcesj ▴ 50
3
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7
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3.6k
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Weird MA-plot (DESeq2)
RNA-Seq DESeq2 confounders
updated 5.2 years ago by 12k • written 5.2 years ago by ▴ 50
0
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1
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3.6k
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Comment: C: Weird MA-plot (DESeq2)
5.2 years ago by garcesj ▴ 50
1
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2
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1.3k
views
Multiple N bases in RNAseq
RNA-Seq Illumina
5.4 years ago by garcesj ▴ 50
0
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0
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1.3k
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Comment: C: Multiple N bases in RNAseq
5.4 years ago by garcesj ▴ 50
0
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0
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5.7k
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Comment: C: PyClone without copy number data
5.9 years ago by garcesj ▴ 50
0
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0
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832
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Activator o repressor protein in a pathway
pathway
6.0 years ago by garcesj ▴ 50
1
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1
reply
1.8k
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Comment: C: GISTIC2, some missing samples during the process
6.1 years ago by garcesj ▴ 50
2
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3
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1.8k
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GISTIC2, some missing samples during the process
gistic2
6.1 years ago by garcesj ▴ 50
0
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0
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1.9k
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Answer: A: Rawcopy copy number analysis
6.2 years ago by garcesj ▴ 50
0
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1
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2.7k
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Comment: C: CDF file for Cytoscan arrays
6.3 years ago by garcesj ▴ 50
0
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3
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2.7k
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CDF file for Cytoscan arrays
array Cystoscan CDF
6.3 years ago by garcesj ▴ 50
0
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0
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3.1k
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Comment: C: cdf environment for cytoscan hd array
6.3 years ago by garcesj ▴ 50
0
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0
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3.2k
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Comment: C: How to find CNV or CN state information from rawcopy output ?
6.3 years ago by garcesj ▴ 50
0
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1
reply
4.4k
views
Comment: C: High Kmer Content in middle of the read
6.7 years ago by garcesj ▴ 50
0
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1
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4.4k
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Answer: A: High Kmer Content in middle of the read
6.7 years ago by garcesj ▴ 50
0
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0
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4.8k
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Answer: A: Varscan2 copynumber 'Parsing Exception' error
6.7 years ago by garcesj ▴ 50
0
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0
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6.3k
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Comment: C: Why different tSNE plot with Seurat and Monocle if they'r using the same R packa
7.0 years ago by garcesj ▴ 50
2
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3
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6.3k
views
Why different tSNE plot with Seurat and Monocle if they'r using the same R package?
single-cell tsne R Seurat monocle
updated 7.0 years ago by ▴ 110 • written 7.0 years ago by ▴ 50
0
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2
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3.9k
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Comment: C: Create a custom exome .genome for IGV
7.3 years ago by garcesj ▴ 50
0
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1
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3.9k
views
Comment: C: Create a custom exome .genome for IGV
7.3 years ago by garcesj ▴ 50
0
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8
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3.9k
views
Create a custom exome .genome for IGV
IGV exome sequencing WES
updated 7.3 years ago by 35k • written 7.3 years ago by ▴ 50
46 results • Page 1 of 1
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