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2
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1
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1.2k
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Answer: Answer: possible reasons that very few significant DEGs from RNAseq
2.0 years ago by vj ▴ 520
4
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2
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4.6k
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Comment: C: Transcript vs. Gene TPM counts?
5.1 years ago by vj ▴ 520
1
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0
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1.3k
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Answer: A: Detect gene expression signatures in own dataset
5.4 years ago by vj ▴ 520
0
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0
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1.5k
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Comment: C: Correct approach to identify differential binding in samples (with no duplicates
5.6 years ago by vj ▴ 520
1
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1
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1.5k
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Answer: A: Correct approach to identify differential binding in samples (with no duplicates
5.6 years ago by vj ▴ 520
15
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5
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21k
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Normalized Bigwig Files
bigwig
updated 5.6 years ago by • 0 • written 11.7 years ago by ▴ 520
0
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0
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5.9k
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Comment: C: Manorm For Differential Histone Binding In Chip-Seq Samples
updated 5.8 years ago by 44k • written 11.2 years ago by ▴ 520
0
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1
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5.9k
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Answer: A: Manorm For Differential Histone Binding In Chip-Seq Samples
updated 5.8 years ago by 44k • written 11.2 years ago by ▴ 520
0
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1
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5.2k
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Comment: C: Which normalization method to use FPKM/TPM?
6.1 years ago by vj ▴ 520
0
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3
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5.2k
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Comment: C: Which normalization method to use FPKM/TPM?
6.1 years ago by vj ▴ 520
1
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1
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5.2k
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Answer: A: Which normalization method to use FPKM/TPM?
6.1 years ago by vj ▴ 520
3
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0
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12k
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Answer: A: How to convert transcript level TPM to gene level TPM ?
6.3 years ago by vj ▴ 520
1
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0
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1.4k
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Answer: A: GSEA - Calculate the probability of each gene being enriched?
6.4 years ago by vj ▴ 520
0
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0
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2.7k
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Answer: A: Transcript Specific Expression Data
10.7 years ago by vj ▴ 520
0
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0
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6.5k
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Comment: C: Large Variation In Rpkm Values Of Different Biological Replicates From Cufflinks
10.8 years ago by vj ▴ 520
3
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0
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9.7k
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Answer: A: How Do I Search A Genome For A Known Motif, And Get An Interval File Of All Inst
10.8 years ago by vj ▴ 520
3
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0
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4.4k
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Answer: A: Peak Length For Chip-Seq Data?
10.8 years ago by vj ▴ 520
1
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0
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2.6k
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Comment: C: Tf Names In Motifdb
10.9 years ago by vj ▴ 520
0
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1
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2.6k
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Answer: A: Tf Names In Motifdb
10.9 years ago by vj ▴ 520
13
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2
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58k
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Answer: A: How To Write Data In A Granges Object To A Bed File.
10.9 years ago by vj ▴ 520
0
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0
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3.6k
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Answer: A: How Does Cufflinks Compute The Fpkm For Reads That Do Not Map In The Proper Pair
10.9 years ago by vj ▴ 520
0
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0
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3.3k
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Answer: A: Mapping Protein Ids
11.0 years ago by vj ▴ 520
0
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1
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40k
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Answer: A: Best Way To Normalize Rna-Seq Data For Expression Profiling
11.0 years ago by vj ▴ 520
1
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0
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4.4k
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Comment: C: Normalizing Bam Files
11.0 years ago by vj ▴ 520
1
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0
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3.6k
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Answer: A: What Tool/Package Would You Recommend For Clustering Large Gene Expression Data?
11.0 years ago by vj ▴ 520
0
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0
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6.7k
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Comment: C: How Can I Create Similarity Matrix From Gene Expression And Rnaseq Data?
11.0 years ago by vj ▴ 520
0
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0
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3.5k
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Comment: C: Removing Duplicates Reads (>= 5)
11.0 years ago by vj ▴ 520
3
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3
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3.5k
views
Removing Duplicates Reads (>= 5)
duplicates picard samtools
updated 11.0 years ago by ▴ 500 • written 11.0 years ago by ▴ 520
0
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0
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3.3k
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Comment: C: Tool For Binning Windowbed Output For K-Means Clustering
11.1 years ago by vj ▴ 520
0
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0
replies
3.0k
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Answer: A: Gsea To Find Function Of Predefined Set Of Genes?
11.2 years ago by vj ▴ 520
3
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1
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3.3k
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Answer: A: Tool For Binning Windowbed Output For K-Means Clustering
11.2 years ago by vj ▴ 520
0
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0
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2.6k
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Answer: A: Genome-Wide Motif Genomic Regions For Tfs
11.2 years ago by vj ▴ 520
1
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0
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5.6k
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Answer: A: A Script To Find Each Seq In A Multiple Fasta Files
11.3 years ago by vj ▴ 520
1
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0
replies
3.4k
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Answer: A: Looking For Motif Finding Tools That Work On Broad Peaks
11.3 years ago by vj ▴ 520
1
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0
replies
3.0k
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Answer: A: Computing Similarity Between Lists Of Enriched Terms
11.3 years ago by vj ▴ 520
2
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0
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6.7k
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Answer: A: R: Heatmap Of Rna-Seq Count Table With Functional Gene Clustering
11.3 years ago by vj ▴ 520
1
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0
replies
11k
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Answer: A: Co-Expression Networks Of Rna-Seq
11.3 years ago by vj ▴ 520
0
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1
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3.0k
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Comment: C: Shrimp Uniquely Aligned Reads
11.6 years ago by vj ▴ 520
1
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3
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3.0k
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Shrimp Uniquely Aligned Reads
rna-seq aligner samtools
updated 11.6 years ago by 12k • written 11.6 years ago by ▴ 520
0
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1
reply
10k
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Comment: C: Kegg Pathway Analysis
11.6 years ago by vj ▴ 520
0
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0
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10k
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Comment: C: Kegg Pathway Analysis
11.6 years ago by vj ▴ 520
2
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5
replies
10k
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Kegg Pathway Analysis
kegg pathway
updated 11.7 years ago by ▴ 180 • written 11.7 years ago by ▴ 520
0
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0
replies
21k
views
Comment: C: Normalized Bigwig Files
11.7 years ago by vj ▴ 520
43 results • Page 1 of 1
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