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23
votes
6
replies
21k
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7 follow
What are Supplementary Reads?
alignment reads
updated 21 months ago by ▴ 10 • written 6.7 years ago by ▴ 40
8
votes
5
replies
1.9k
views
Difference between 'intergenic' and 'ncRNA' in annotation.
annotation annovar intergenic ncrna
updated 5.4 years ago by 20 • written 6.6 years ago by ▴ 40
0
votes
2
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1.9k
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Comment: C: Difference between 'intergenic' and 'ncRNA' in annotation.
6.6 years ago by 2012secondseason ▴ 40
10
votes
3
replies
5.5k
views
When Hard clipping is used instead of the Soft clipping ?
hard clipping cigar clipping
updated 6.7 years ago by 105k • written 6.7 years ago by ▴ 40
6
votes
6
replies
1.7k
views
What is URL of Contig in VCF format?
contig
updated 6.7 years ago by 44k • written 6.7 years ago by ▴ 40
0
votes
1
reply
1.7k
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Comment: C: What is URL of Contig in VCF format?
6.7 years ago by 2012secondseason ▴ 40
1
vote
1
reply
1.3k
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How do we get VCF's ALT field values?
vcf alt bcftools
6.7 years ago by 2012secondseason ▴ 40
0
votes
0
replies
3.3k
views
Comment: C: What's 1000 Genome indel calls??
6.7 years ago by 2012secondseason ▴ 40
3
votes
3
replies
3.3k
views
What's 1000 Genome indel calls??
1000Genome realignertargetcreater gatk
updated 3.7 years ago by • 0 • written 6.7 years ago by ▴ 40
7
votes
6
replies
4.1k
views
What is Read Group platform??
read-group
updated 18 months ago by 44k • written 6.7 years ago by ▴ 40
0
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0
replies
3.1k
views
Comment: C: In CIGAR table, what does P operation mean?
6.7 years ago by 2012secondseason ▴ 40
2
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3
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3.1k
views
In CIGAR table, what does P operation mean?
CIGAR padding silent deletion
updated 6.7 years ago by 164k • written 6.7 years ago by ▴ 40
0
votes
0
replies
4.1k
views
Comment: C: What is Read Group platform??
6.7 years ago by 2012secondseason ▴ 40
0
votes
1
reply
5.5k
views
Comment: C: what's Validation stringency?
6.7 years ago by 2012secondseason ▴ 40
5
votes
3
replies
5.5k
views
what's Validation stringency?
picard
updated 19 months ago by 44k • written 6.7 years ago by ▴ 40
2
votes
4
replies
1.6k
views
What's the difference between 'clipping' and 'unmapped' and 'skipped'?
tablet cigar alignment
updated 6.7 years ago by ▴ 10 • written 6.7 years ago by ▴ 40
4
votes
1
reply
1.4k
views
How can overlap with paired end sequence??
cigar tablet paired end alignment
updated 6.7 years ago by ★ 2.9k • written 6.7 years ago by ▴ 40
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