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116
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Comment: Comment: Question about seqkit sort function
4 hours ago by shenwei356 8.7k
1
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0
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377
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Comment: Comment: Is there an elegant way to deal with the version indicator in reference FASTA fi
24 days ago by shenwei356 8.7k
2
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1
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377
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Comment: Comment: Is there an elegant way to deal with the version indicator in reference FASTA fi
24 days ago by shenwei356 8.7k
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0
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320
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Comment: Comment: Is there an easy way to scrape a whole bunch of NCBI RefSeq FASTA from NCBI?
4 weeks ago by shenwei356 8.7k
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0
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299
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Comment: Comment: how to order paired-end reads to use in kaiju?
10 weeks ago by shenwei356 8.7k
1
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1
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516
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Comment: Comment: Remote BLASTx : Strain specific search.
11 weeks ago by shenwei356 8.7k
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1
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497
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Comment: Comment: Nr Database just for Prokaryotes
12 weeks ago by shenwei356 8.7k
2
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0
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420
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Answer: Answer: Rapid K-mer search
12 weeks ago by shenwei356 8.7k
0
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0
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613
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Comment: Comment: How to check if all read names are paired properly in paired end fastq.gz files?
4 months ago by shenwei356 8.7k
0
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0
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389
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Comment: Comment: Empty txt file as an output of "seqkit stats" for multiple fastq files
5 months ago by shenwei356 8.7k
1
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0
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9.1k
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Comment: Comment: how to split multi-fasta file into single fasta file named by header
5 months ago by shenwei356 8.7k
1
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0
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492
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Comment: Comment: Construction of a phylogentic tree for thousands of bacterial genomes
5 months ago by shenwei356 8.7k
1
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1
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533
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Comment: Comment: assemble extracted kmers into longer contigs/sequences
5 months ago by shenwei356 8.7k
2
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1
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533
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Answer: Answer: assemble extracted kmers into longer contigs/sequences
5 months ago by shenwei356 8.7k
1
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0
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432
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Comment: Comment: Publish a Letter in higher impact vs Research article in lower impact
6 months ago by shenwei356 8.7k
3
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1
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1.6k
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Answer: Answer: Bacterial plasmid analysis
6 months ago by shenwei356 8.7k
0
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0
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858
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Comment: Comment: Rename multiple fastq.gz files
7 months ago by shenwei356 8.7k
0
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0
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1.1k
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
7 months ago by shenwei356 8.7k
1
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2
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1.1k
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Answer: Answer: Removing adapter/primer sequence from reads while keeping flanking regions
7 months ago by shenwei356 8.7k
0
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0
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683
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Comment: Comment: Parsing fasta file by coordinates
8 months ago by shenwei356 8.7k
1
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1
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545
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Comment: Comment: Seqkit Replace
8 months ago by shenwei356 8.7k
2
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1
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545
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Answer: Answer: Seqkit Replace
8 months ago by shenwei356 8.7k
2
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1
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1.0k
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Comment: Comment: Max lenght reads from fastq
8 months ago by shenwei356 8.7k
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0
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303
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Comment: Comment: Conda appears different than yesterday
9 months ago by shenwei356 8.7k
0
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0
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896
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Comment: Comment: Blastn for all bacteria genomes; create the db
9 months ago by shenwei356 8.7k
0
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1
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896
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Answer: Answer: Blastn for all bacteria genomes; create the db
9 months ago by shenwei356 8.7k
7
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5
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5.2k
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How to get consensus FASTA sequence from GFA assembly graph?
gfa consensus
updated 10 months ago by ▴ 40 • written 5.9 years ago by 8.7k
0
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0
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294
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Comment: Comment: Calculating percentage of reads mapped to a reference genome
10 months ago by shenwei356 8.7k
3
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1
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1.2k
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Answer: Answer: Renaming fasta files with their headers
11 months ago by shenwei356 8.7k
0
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1
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735
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Comment: Comment: Species coverage in the NCBI protein NR database ?
12 months ago by shenwei356 8.7k
0
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0
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735
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Comment: Comment: Species coverage in the NCBI protein NR database ?
12 months ago by shenwei356 8.7k
5
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0
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855
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Answer: Answer: how to sort fasta file accroding to header
12 months ago by shenwei356 8.7k
0
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1
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2.4k
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Comment: Comment: How to limit fasta header to 40 characters?
14 months ago by shenwei356 8.7k
13
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6
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5.7k
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Tool: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
CSV Golang TSV
15 months ago by shenwei356 8.7k
1
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0
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5.7k
views
Answer: Answer: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
15 months ago by shenwei356 8.7k
0
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0
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26k
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Comment: Comment: searching reads with a certain sequence in fastq file
16 months ago by shenwei356 8.7k
0
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1
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672
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Answer: Answer: Question about sequence alignment
16 months ago by shenwei356 8.7k
3
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0
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1.1k
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Answer: Answer: How to extract sequences from multiple fastq files based on a certain sequence
17 months ago by shenwei356 8.7k
2
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0
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1.2k
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Answer: Answer: Bash solution to replace part of FASTA headers witch contain matching values in
17 months ago by shenwei356 8.7k
1
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0
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2.8k
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Answer: Answer: Getting sequences from fastq file using Grep command
17 months ago by shenwei356 8.7k
2
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0
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860
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Answer: Answer: how to sort unique seq from fasta files
17 months ago by shenwei356 8.7k
0
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1
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16k
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Comment: Comment: How to concatenate multiple fasta file
18 months ago by shenwei356 8.7k
2
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1
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1.6k
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Comment: Comment: how to use nohup with parallel
18 months ago by shenwei356 8.7k
0
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1
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1.3k
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Answer: Answer: Add a genome to a kraken library
18 months ago by shenwei356 8.7k
2
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0
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610
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Answer: Answer: Randomly reduce size of reads but preserving the distribution
19 months ago by shenwei356 8.7k
4
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1
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2.4k
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Answer: Answer: Compare two very close genomes (.fasta)
19 months ago by shenwei356 8.7k
1
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1
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807
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Answer: Answer: How to identify Gap location
19 months ago by shenwei356 8.7k
2
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0
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519
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Answer: Answer: I need a tool that allows me to see a whole genome and point out previously anno
19 months ago by shenwei356 8.7k
2
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0
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1.2k
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Answer: Answer: how to rename or time bunch of file names in fasta file
19 months ago by shenwei356 8.7k
0
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1
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643
views
Answer: Answer: genome annotation [sstart] [send] - how to get protein sequence from gene
20 months ago by shenwei356 8.7k
776 results • Page 1 of 16
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