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734
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Generating genesets matched for GC content and length
next-gen dna RNA-Seq dna-seq
updated 4.4 years ago by ▴ 30 • written 4.4 years ago by ▴ 50
1
vote
4
replies
2.7k
views
TPM for correlation between genes
rnaseq
updated 4.4 years ago by ▴ 40 • written 4.4 years ago by ▴ 50
0
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1
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2.7k
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Comment: C: TPM for correlation between genes
4.4 years ago by gradstudentNew ▴ 50
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2
replies
1.2k
views
PCA with split up chromosomes
PCA GWAS
4.5 years ago by gradstudentNew ▴ 50
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1
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1.1k
views
Comment: C: RNAseq cell line as a covariate
4.7 years ago by gradstudentNew ▴ 50
2
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3
replies
1.1k
views
RNAseq cell line as a covariate
rnaseq deseq2 cellline transcriptome
updated 4.7 years ago by 88k • written 4.7 years ago by ▴ 50
0
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1
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3.4k
views
Comment: C: Effect Allele Frequency in base summary statistics for PRSs calculation
4.8 years ago by gradstudentNew ▴ 50
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0
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667
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Meta-analyzing DESeq2 output
rnaseq deseq2
4.8 years ago by gradstudentNew ▴ 50
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0
replies
859
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Comment: C: DESeq2 counts (inverse relationship)
4.8 years ago by gradstudentNew ▴ 50
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1
reply
859
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Comment: C: DESeq2 counts (inverse relationship)
4.8 years ago by gradstudentNew ▴ 50
0
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6
replies
859
views
DESeq2 counts (inverse relationship)
RNA-Seq counts
updated 4.8 years ago by 101k • written 4.8 years ago by ▴ 50
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0
replies
1.1k
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Comment: C: Complex DESeq2 Model with different gene dosages
4.8 years ago by gradstudentNew ▴ 50
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0
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1.1k
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Comment: C: Complex DESeq2 Model with different gene dosages
4.8 years ago by gradstudentNew ▴ 50
2
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4
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1.1k
views
Complex DESeq2 Model with different gene dosages
DESeq2 RNAseq Statistics Genes
4.8 years ago by gradstudentNew ▴ 50
11
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9
replies
9.1k
views
Extracting certain columns from VCF file
vcf genotype vcftools exome
updated 20 months ago by 44k • written 6.5 years ago by ▴ 50
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1
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1.3k
views
Complicated Multi-factor Differential Expression
RNAseq Multifactor Differential Expression Sleuth
updated 5.9 years ago by 8.3k • written 5.9 years ago by ▴ 50
3
votes
2
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4.2k
views
Keeping both A1/A2 in PLINK for assoc/logistic output
PLINK GWAS
updated 6.3 years ago by 11k • written 6.3 years ago by ▴ 50
0
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1
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1.9k
views
Best way to impute GWAS summary statistics
GWAS Summary Statistics imputation genotyping
6.4 years ago by gradstudentNew ▴ 50
1
vote
4
replies
8.9k
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Extracting genotypes and filtering from a VCF file containing multiple exomes of families
DNA-seq genotype filter vcf exome
updated 6.5 years ago by 164k • written 6.5 years ago by ▴ 50
0
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1
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8.9k
views
Comment: A: Extracting genotypes and filtering from a VCF file containing multiple exomes of
6.5 years ago by gradstudentNew ▴ 50
1
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1
reply
9.1k
views
Comment: C: Extracting certain columns from VCF file
6.5 years ago by gradstudentNew ▴ 50
0
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1
reply
9.1k
views
Comment: C: Extracting certain columns from VCF file
updated 6.5 years ago by 147k • written 6.5 years ago by ▴ 50
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