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Comment: C: Hot to retrieval a SNP from a very big vcf file by position with tabix
5.7 years ago by vw ▴ 60
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3.2k
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Comment: C: Hot to retrieval a SNP from a very big vcf file by position with tabix
5.7 years ago by vw ▴ 60
2
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4
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3.2k
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Hot to retrieval a SNP from a very big vcf file by position with tabix
tabix vcftools vcf SNP
5.7 years ago by vw ▴ 60
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0
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3.8k
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Comment: C: Does is make sense if I select a subset from the count matrix to do DE analysis?
5.7 years ago by vw ▴ 60
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1
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3.8k
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Comment: C: Does is make sense if I select a subset from the count matrix to do DE analysis?
5.7 years ago by vw ▴ 60
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1
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3.8k
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Comment: C: Does is make sense if I select a subset from the count matrix to do DE analysis?
5.7 years ago by vw ▴ 60
9
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7
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3.8k
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Does is make sense if I select a subset from the count matrix to do DE analysis?
DESeq2 Limma RNA-Seq
updated 5.7 years ago by 6.2k • written 5.7 years ago by ▴ 60
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0
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5.1k
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Comment: C: RNAseq: how to make design matrix for limma
5.7 years ago by vw ▴ 60
4
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2
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5.1k
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RNAseq: how to make design matrix for limma
Limma RNA-Seq DESeq2
updated 5.8 years ago by ★ 4.1k • written 5.8 years ago by ▴ 60
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16k
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Comment: C: ATAC-seq DE analysis
5.8 years ago by vw ▴ 60
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1
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16k
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Comment: C: ATAC-seq DE analysis
5.8 years ago by vw ▴ 60
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1.8k
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Comment: C: What is the "-" option of samtools?
5.8 years ago by vw ▴ 60
2
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2
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1.8k
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What is the "-" option of samtools?
samtools
updated 5.8 years ago by 165k • written 5.8 years ago by ▴ 60
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0
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1.3k
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Comment: C: Can F-seq appers the p-value for each peak in the output?
6.1 years ago by vw ▴ 60
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1
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1.3k
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Comment: C: Can F-seq appers the p-value for each peak in the output?
6.1 years ago by vw ▴ 60
0
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4
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1.3k
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Can F-seq appers the p-value for each peak in the output?
ChIP-Seq ATAC-Seq
6.1 years ago by vw ▴ 60
1
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0
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3.1k
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Answer: A: F-seq output: Meaning of bed columns
6.1 years ago by vw ▴ 60
0
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0
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1.7k
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What's the meaning of column "score" of output bed file from F-seq
ChIP-Seq ATAC-Seq PeakCalling
6.1 years ago by vw ▴ 60
1
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1
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9.6k
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Comment: C: How to count the total aligned bases in BAM?
6.8 years ago by vw ▴ 60
10
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13
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9.6k
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6 follow
How to count the total aligned bases in BAM?
bam pysam pybedtools python
6.8 years ago by vw ▴ 60
0
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0
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9.6k
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Comment: C: How to count the total aligned bases in BAM?
6.8 years ago by vw ▴ 60
0
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2
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9.6k
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Comment: C: How to count the total aligned bases in BAM?
6.8 years ago by vw ▴ 60
0
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0
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9.6k
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Comment: C: How to count the total aligned bases in BAM?
6.8 years ago by vw ▴ 60
0
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1
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2.7k
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Comment: C: How to compute target aligned reads/total aligned reads (read enrichment) with P
6.8 years ago by vw ▴ 60
0
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4
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2.7k
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How to compute target aligned reads/total aligned reads (read enrichment) with Python?
pybedtools pysam bam bed
6.8 years ago by vw ▴ 60
0
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1
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2.7k
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Comment: C: How to compute target aligned reads/total aligned reads (read enrichment) with P
6.8 years ago by vw ▴ 60
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