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Comment:
Comment: Performing Needleman-Wunsch Global Alignment for multiple mutant proteins agains
9 weeks ago by
Andrzej Zielezinski
11k
0
votes
0
replies
7.4k
views
Comment:
Comment: Where to find BLAST+ default parameters?
4 months ago by
Andrzej Zielezinski
11k
3
votes
5
replies
2.1k
views
How to collapse leaves with the same name in ETE3 tree?
python
ete3
updated 8 months ago by
Yogesh
• 0 • written 3.4 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
23k
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Comment:
Comment: how do I run repeat masker
10 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.7k
views
Comment:
Comment: Get a reference phylogenetic tree of known taxa from GTDB
11 months ago by
Andrzej Zielezinski
11k
1
vote
0
replies
928
views
Answer:
Answer: Is reciprocal best hit method applicable for non-coding RNA to find orthologs?
16 months ago by
Andrzej Zielezinski
11k
4
votes
0
replies
939
views
Answer:
Answer: Tool for aligning short protein sequences
22 months ago by
Andrzej Zielezinski
11k
2
votes
0
replies
849
views
Answer:
Answer: Choosing right statistical test in genomics
22 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.7k
views
Answer:
Answer: Global Alignment
22 months ago by
Andrzej Zielezinski
11k
1
vote
0
replies
1.3k
views
Comment:
Comment: understand the gene result in ncbi
23 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
3.6k
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Comment:
Comment: fasta sequences into non-overlapping k-mers using python
2.0 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
3.6k
views
Answer:
Answer: fasta sequences into non-overlapping k-mers using python
2.1 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.6k
views
Answer:
Answer: Extracting k-mer counts from multiple genome sequence files
2.1 years ago by
Andrzej Zielezinski
11k
4
votes
2
replies
1.4k
views
Answer:
Answer: Filtering a fasta file based on blast results file
2.1 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
4.7k
views
Answer:
Answer: How to delete spaces in rows from csv file in Python
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
4.7k
views
Comment:
Comment: How to delete spaces in rows from csv file in Python
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
4.7k
views
Comment:
Comment: How to delete spaces in rows from csv file in Python
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
2.8k
views
Answer:
Answer: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
1
vote
0
replies
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.1k
views
Answer:
Answer: Number of sequences in RefSeq.
2.1 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
2.8k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.1k
views
Comment:
Comment: Making my python code better
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.1k
views
Comment:
Comment: Parsing a genbank file and outputting specific feature information to a csv usin
2.2 years ago by
Andrzej Zielezinski
11k
2
votes
0
replies
5.5k
views
Comment:
Comment: get the uniprot accession from ensembl protein ID
2.2 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.1k
views
Answer:
Answer: Parsing a genbank file and outputting specific feature information to a csv usin
2.2 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
842
views
Answer:
Answer: extracting data from genbank file
2.2 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.2k
views
Answer:
Answer: From fastq files to fasta
2.2 years ago by
Andrzej Zielezinski
11k
2
votes
0
replies
1.2k
views
Answer:
Answer: how to filter fasta file?
2.2 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
1.6k
views
Comment:
Comment: BLAST, set a limit to the number of hits in output
2.2 years ago by
Andrzej Zielezinski
11k
1
vote
0
replies
3.7k
views
Comment:
Comment: Sequence identity between two protein sequences
2.2 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
3.7k
views
Answer:
Answer: Sequence identity between two protein sequences
2.2 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.5k
views
Comment:
Comment: Python complex formula using the items of a dictionary (or a list of dictionarie
2.2 years ago by
Andrzej Zielezinski
11k
5
votes
2
replies
1.5k
views
Answer:
Answer: Python complex formula using the items of a dictionary (or a list of dictionarie
2.2 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
795
views
Answer:
Answer: Advanced search for the sequences on NCBI website
2.3 years ago by
Andrzej Zielezinski
11k
4
votes
0
replies
992
views
Answer:
Answer: How a fastq.gz file is formatted?
2.3 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.5k
views
Answer:
Answer: How can I remove the sequences that contain ambiogous amino acids from a multipl
2.3 years ago by
Andrzej Zielezinski
11k
3
votes
0
replies
1.3k
views
Answer:
Answer: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
2.3 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.8k
views
Comment:
Comment: Only getting 25 results from UniProt REST ID Mapping
2.4 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
1.8k
views
Answer:
Answer: Only getting 25 results from UniProt REST ID Mapping
2.4 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
791
views
Comment:
Comment: How many nr database subdirectories are there?
2.4 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
1.5k
views
Answer:
Answer: UniProt REST Mapping Problem
2.4 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1000
views
Answer:
Answer: virus classification
2.7 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
1.1k
views
Comment:
Comment: Too Many Protein Sequences To Align, Advice?
2.7 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.1k
views
Answer:
Answer: Too Many Protein Sequences To Align, Advice?
2.7 years ago by
Andrzej Zielezinski
11k
3
votes
2
replies
872
views
Ortholog clusters in Bacteria
orthologs
gene
family
bacteria
GtDB
updated 2.8 years ago by
Mensur Dlakic
★ 28k • written 2.8 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
829
views
Comment:
Comment: Can ETE3 list all bacterial species present in NCBI Taxonomy?
2.8 years ago by
Andrzej Zielezinski
11k
448 results • Page
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