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557
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Comment:
Comment: Overlapping reads between two BED windows
12 weeks ago by
pablo
▴ 310
0
votes
1
reply
557
views
Comment:
Comment: Overlapping reads between two BED windows
12 weeks ago by
pablo
▴ 310
1
vote
4
replies
557
views
Overlapping reads between two BED windows
samtools
bam
bedtools
coverage
12 weeks ago by
pablo
▴ 310
1
vote
1
reply
1.2k
views
Comment:
Comment: Running fastqc in parallel
4 months ago by
pablo
▴ 310
13
votes
8
replies
1.2k
views
Running fastqc in parallel
quality
fastqc
updated 4 months ago by
BioinfGuru
★ 2.1k • written 4 months ago by
pablo
▴ 310
0
votes
1
reply
1.2k
views
Comment:
Comment: Running fastqc in parallel
4 months ago by
pablo
▴ 310
0
votes
0
replies
622
views
Comment:
Comment: Compute bootstrap values on consensus tree
7 months ago by
pablo
▴ 310
0
votes
1
reply
622
views
Comment:
Comment: Compute bootstrap values on consensus tree
7 months ago by
pablo
▴ 310
0
votes
1
reply
622
views
Comment:
Comment: Compute bootstrap values on consensus tree
7 months ago by
pablo
▴ 310
0
votes
4
replies
622
views
Compute bootstrap values on consensus tree
phylogeny
tree
raxml
7 months ago by
pablo
▴ 310
0
votes
0
replies
258
views
computeGCBias outputs
GC
bam
deepTools
GCbias
8 months ago by
pablo
▴ 310
0
votes
0
replies
549
views
Comment:
Comment: Seqkit Replace
8 months ago by
pablo
▴ 310
0
votes
1
reply
549
views
Comment:
Comment: Seqkit Replace
8 months ago by
pablo
▴ 310
3
votes
4
replies
549
views
Seqkit Replace
seqkit
fasta
updated 8 months ago by
Ram
44k • written 8 months ago by
pablo
▴ 310
0
votes
1
reply
777
views
Comment:
Comment: Extract SNPs present in mutants
9 months ago by
pablo
▴ 310
0
votes
1
reply
777
views
Comment:
Comment: Extract SNPs present in mutants
9 months ago by
pablo
▴ 310
0
votes
1
reply
777
views
Comment:
Comment: Extract SNPs present in mutants
9 months ago by
pablo
▴ 310
2
votes
7
replies
777
views
Extract SNPs present in mutants
snp
vcftools
vcf
bcftools
updated 9 months ago by
Pierre Lindenbaum
164k • written 9 months ago by
pablo
▴ 310
4
votes
3
replies
676
views
Parsing columns with awk
awk
updated 13 months ago by
Ram
44k • written 13 months ago by
pablo
▴ 310
0
votes
1
reply
1.8k
views
Comment:
Comment: Does ASVs IDs from dada2 have specific taxonomic assignments?
13 months ago by
pablo
▴ 310
0
votes
0
replies
1.1k
views
Comment:
Comment: Phyloseq and ASV names between datasets
13 months ago by
pablo
▴ 310
0
votes
0
replies
1.8k
views
Comment:
Comment: Does ASVs IDs from dada2 have specific taxonomic assignments?
13 months ago by
pablo
▴ 310
0
votes
1
reply
1.1k
views
Comment:
Comment: Phyloseq and ASV names between datasets
13 months ago by
pablo
▴ 310
0
votes
3
replies
1.1k
views
Phyloseq and ASV names between datasets
dada2
phyloseq
16S
asv
updated 13 months ago by
antonioggsousa
3.2k • written 13 months ago by
pablo
▴ 310
1
vote
1
reply
1.9k
views
Comment:
Comment: Interpret IGV output inversion
15 months ago by
pablo
▴ 310
1
vote
1
reply
1.9k
views
Comment:
Comment: Interpret IGV output inversion
15 months ago by
pablo
▴ 310
1
vote
1
reply
1.9k
views
Comment:
Comment: Interpret IGV output inversion
15 months ago by
pablo
▴ 310
0
votes
1
reply
1.9k
views
Comment:
Comment: Interpret IGV output inversion
15 months ago by
pablo
▴ 310
0
votes
1
reply
1.9k
views
Comment:
Comment: Interpret IGV output inversion
15 months ago by
pablo
▴ 310
5
votes
11
replies
1.9k
views
Interpret IGV output inversion
variant-calling
IGV
alignment
updated 15 months ago by
cmdcolin
★ 4.0k • written 15 months ago by
pablo
▴ 310
0
votes
0
replies
657
views
Comment:
Comment: Expect heterozygous variant from reads
16 months ago by
pablo
▴ 310
0
votes
2
replies
657
views
Expect heterozygous variant from reads
bam
align
igv
16 months ago by
pablo
▴ 310
0
votes
0
replies
356
views
Detect heterozygous variant from reads
alignement
blast
bam
igv
16 months ago by
pablo
▴ 310
0
votes
1
reply
804
views
Variant calling analysis on phased assembly
variant-calling
bam
pbsv
updated 17 months ago by
Ram
44k • written 17 months ago by
pablo
▴ 310
0
votes
2
replies
1.0k
views
Very high coverage Nanopore alignment Hg38
IGV
nanopore
alignment
updated 20 months ago by
prasundutta87
▴ 670 • written 20 months ago by
pablo
▴ 310
0
votes
0
replies
772
views
Comment:
Comment: Structural variants identified from same reads / assembly
21 months ago by
pablo
▴ 310
0
votes
2
replies
772
views
Structural variants identified from same reads / assembly
variants
insertion
deletion
structural
assembly
21 months ago by
pablo
▴ 310
0
votes
1
reply
956
views
Comment:
Comment: Different blast results between NR or local genome
23 months ago by
pablo
▴ 310
2
votes
4
replies
956
views
Different blast results between NR or local genome
blast
yeast
updated 23 months ago by
SequenceServer
▴ 20 • written 23 months ago by
pablo
▴ 310
1
vote
0
replies
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
3
votes
31
replies
4.8k
views
Extract reads from BAM file with known variant
bam
variant
samtools
2.3 years ago by
pablo
▴ 310
0
votes
0
replies
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
1
reply
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
0
votes
2
replies
4.8k
views
Comment:
Comment: Extract reads from BAM file with known variant
2.3 years ago by
pablo
▴ 310
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