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0
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replies
1.3k
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Comment:
Comment: pbmm2 alignment of long reads
4 months ago by
priya.bmg
▴ 60
0
votes
1
reply
1.3k
views
Comment:
Comment: pbmm2 alignment of long reads
5 months ago by
priya.bmg
▴ 60
4
votes
9
replies
1.3k
views
pbmm2 alignment of long reads
Long-reads
pbmm2
alignment
4 months ago by
priya.bmg
▴ 60
0
votes
1
reply
1.3k
views
Comment:
Comment: pbmm2 alignment of long reads
5 months ago by
priya.bmg
▴ 60
0
votes
0
replies
1.3k
views
Comment:
Comment: pbmm2 alignment of long reads
5 months ago by
priya.bmg
▴ 60
0
votes
2
replies
414
views
Regions not clear in VCF
whole-exome
variant-calling
updated 7 months ago by
Ram
44k • written 7 months ago by
priya.bmg
▴ 60
0
votes
0
replies
883
views
Comment:
Comment: Confirming called variants
13 months ago by
priya.bmg
▴ 60
0
votes
1
reply
883
views
Comment:
Comment: Confirming called variants
13 months ago by
priya.bmg
▴ 60
0
votes
5
replies
883
views
Confirming called variants
GATK
gnomAD
updated 13 months ago by
barslmn
★ 2.3k • written 13 months ago by
priya.bmg
▴ 60
0
votes
0
replies
426
views
Visualize tfrecords file from Deepvariant
gzipped
flow
tensor
Deepvariant
records
18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
26k
views
Comment:
Comment: intersect VCF files
21 months ago by
priya.bmg
▴ 60
0
votes
1
reply
26k
views
Comment:
Comment: intersect VCF files
21 months ago by
priya.bmg
▴ 60
0
votes
1
reply
26k
views
Comment:
Comment: intersect VCF files
21 months ago by
priya.bmg
▴ 60
0
votes
0
replies
730
views
Comment:
Comment: Sequencing old DNA samples
2.1 years ago by
priya.bmg
▴ 60
2
votes
2
replies
730
views
Sequencing old DNA samples
Sequencing
2.1 years ago by
priya.bmg
▴ 60
0
votes
1
reply
636
views
Pandas Data Frame
vcf
GATK-SV
pandas
annotation
updated 2.1 years ago by
husensofteng
▴ 410 • written 2.1 years ago by
priya.bmg
▴ 60
0
votes
1
reply
930
views
Comment:
Comment: Coexpression analysis
2.1 years ago by
priya.bmg
▴ 60
0
votes
1
reply
930
views
Comment:
Comment: Coexpression analysis
2.1 years ago by
priya.bmg
▴ 60
1
vote
5
replies
930
views
Coexpression analysis
CEMitool
R
updated 17 months ago by
Ram
44k • written 2.1 years ago by
priya.bmg
▴ 60
0
votes
0
replies
3.2k
views
Comment:
Comment: WGCNA, module trait relationship
2.1 years ago by
priya.bmg
▴ 60
0
votes
0
replies
908
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
2.1 years ago by
priya.bmg
▴ 60
0
votes
1
reply
908
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
2.1 years ago by
priya.bmg
▴ 60
1
vote
4
replies
908
views
Loading Traitdata file for WGCNA analysis
R
WGCNA
updated 20 months ago by
Ram
44k • written 2.1 years ago by
priya.bmg
▴ 60
0
votes
0
replies
424
views
Gene prioritization
MAGMA
gene-prioritization
updated 17 months ago by
Ram
44k • written 2.2 years ago by
priya.bmg
▴ 60
2
votes
4
replies
2.5k
views
PacBio Raw Data File Formats
PacBio
updated 20 months ago by
Ram
44k • written 2.3 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.2k
views
Comment:
Comment: Lockfile command not found
2.3 years ago by
priya.bmg
▴ 60
0
votes
1
reply
1.1k
views
Pacbio workflow
structural
pbsv
variants
updated 2.3 years ago by
Maxine
▴ 50 • written 2.9 years ago by
priya.bmg
▴ 60
0
votes
2
replies
701
views
Bacterial contamination in human DNA sample
Long-read-sequencing
Bacterial-contamination
updated 7 months ago by
Ram
44k • written 2.4 years ago by
priya.bmg
▴ 60
0
votes
0
replies
502
views
Methylation calling -Primrose Package
Methylation
CIGAR
PacBio
2.4 years ago by
priya.bmg
▴ 60
0
votes
0
replies
839
views
Comment:
Comment: Hard filtering variants
2.7 years ago by
priya.bmg
▴ 60
1
vote
2
replies
839
views
Hard filtering variants
whole
exome
data
2.7 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.2k
views
Comment:
Comment: Lockfile command not found
2.8 years ago by
priya.bmg
▴ 60
1
vote
1
reply
2.2k
views
Comment:
Comment: Lockfile command not found
2.8 years ago by
priya.bmg
▴ 60
3
votes
8
replies
2.2k
views
Lockfile command not found
Oslo
Lockfile
conda
concurrency
2.3 years ago by
priya.bmg
▴ 60
0
votes
0
replies
655
views
Snakemake workflow-PacBio
Snakemake
PacBio
2.8 years ago by
priya.bmg
▴ 60
0
votes
0
replies
52k
views
Comment:
Comment: Filtering Vcf File
2.9 years ago by
priya.bmg
▴ 60
0
votes
1
reply
1.1k
views
Filtering of rare variants
filtering
Rare
variants
updated 3.0 years ago by
Pierre Lindenbaum
164k • written 3.0 years ago by
priya.bmg
▴ 60
1
vote
2
replies
1.2k
views
Shared variants
filtering
variants
GATK
updated 3.0 years ago by
sbstevenlee
▴ 480 • written 3.0 years ago by
priya.bmg
▴ 60
0
votes
1
reply
694
views
Post filtering analysis for exome data
shared
rare
Hard-filtering
variants
updated 3.0 years ago by
Pierre Lindenbaum
164k • written 3.0 years ago by
priya.bmg
▴ 60
0
votes
0
replies
536
views
False negatives -Hard filtering
calling
Variant
GATK
Exome
Concordance
3.0 years ago by
priya.bmg
▴ 60
0
votes
1
reply
660
views
Individual or joint variant call ing
exome
Filtering
analysis
variants
updated 3.1 years ago by
brunobsouzaa
▴ 830 • written 3.1 years ago by
priya.bmg
▴ 60
0
votes
1
reply
633
views
Preprocessing exome sequence
Analysis
workflow-Germline
GATK
Variant
updated 3.2 years ago by
ATpoint
85k • written 3.2 years ago by
priya.bmg
▴ 60
0
votes
0
replies
749
views
Error in merged bam files
picard
GATK
NGS
3.2 years ago by
priya.bmg
▴ 60
0
votes
1
reply
739
views
Mark duplicates the bam files sorted by coordinates
Spark
duplicates
Mark
updated 3.2 years ago by
benformatics
4.0k • written 3.2 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.5k
views
Comment:
Comment: Exec format error in unmapped bam file
3.2 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.5k
views
Comment:
Comment: Exec format error in unmapped bam file
3.2 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.5k
views
Comment:
Comment: Exec format error in unmapped bam file
3.2 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.5k
views
Comment:
Comment: Exec format error in unmapped bam file
3.2 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.5k
views
Comment:
Comment: Exec format error in unmapped bam file
3.2 years ago by
priya.bmg
▴ 60
0
votes
9
replies
2.5k
views
Exec format error in unmapped bam file
bam
samtools
updated 20 months ago by
Ram
44k • written 3.2 years ago by
priya.bmg
▴ 60
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