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0
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5
replies
1.3k
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Best input sample (CNV)
ChIP-Seq
updated 4.6 years ago by 20 • written 7.1 years ago by ▴ 600
0
votes
1
reply
1.9k
views
User guide of FunPat
FunPat
updated 4.8 years ago by • 0 • written 8.1 years ago by ▴ 600
4
votes
3
replies
3.0k
views
SNP zygosity from RNA-Seq data (BAM file)
SNP RNA-Seq
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 600
0
votes
1
reply
15k
views
Comment: C: Plotting Reads Around Tss
updated 4.9 years ago by 44k • written 11.1 years ago by ▴ 600
0
votes
2
replies
9.4k
views
Comment: C: How to normalise read count per gene
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 600
0
votes
0
replies
7.7k
views
Comment: C: Quantification of RNA-Seq bam files (STAR + HTSeq count)
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 600
0
votes
0
replies
11k
views
Comment: C: Matplotlib comprehensive chromosome drawing
5.4 years ago by ChIP ▴ 600
9
votes
7
replies
9.2k
views
Generate Random Genomic Regions
chip-seq
updated 5.8 years ago by ▴ 110 • written 11.3 years ago by ▴ 600
7
votes
4
replies
20k
views
How To Compute The Significance Of The Overlap Of The Size Of The Intersection Of Two Gene Sets.
pathway statistics
updated 2.4 years ago by 44k • written 11.3 years ago by ▴ 600
5
votes
7
replies
11k
views
Rcircos: Need Guidance
chip-seq r
updated 6.3 years ago by ▴ 110 • written 11.3 years ago by ▴ 600
0
votes
1
reply
1.3k
views
Comment: C: Best input sample (CNV)
7.1 years ago by ChIP ▴ 600
0
votes
0
replies
1.3k
views
Comment: C: Best input sample (CNV)
7.1 years ago by ChIP ▴ 600
7
votes
4
replies
4.3k
views
Downloading genomic interval for hg38
ChIP-Seq
updated 7.4 years ago by 36k • written 7.4 years ago by ▴ 600
0
votes
1
reply
1.8k
views
Comment: C: Binning the genomic regions and counting reads
7.7 years ago by ChIP ▴ 600
4
votes
3
replies
1.8k
views
Binning the genomic regions and counting reads
Bed tool bash
updated 7.7 years ago by ★ 3.5k • written 7.7 years ago by ▴ 600
3
votes
3
replies
1.9k
views
Identifying DEG from time course data without condition
DESeq EdgeR RNA-Seq
updated 8.0 years ago by 8.3k • written 8.0 years ago by ▴ 600
0
votes
0
replies
2.1k
views
Comment: C: Ensembl ID conversion for a specific build
8.1 years ago by ChIP ▴ 600
4
votes
6
replies
2.1k
views
Ensembl ID conversion for a specific build
GeneID-Conversion Ensembl
updated 8.1 years ago by ★ 5.2k • written 8.1 years ago by ▴ 600
0
votes
0
replies
2.1k
views
Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.1 years ago by ChIP ▴ 600
0
votes
7
replies
2.1k
views
Identification of 3'UTR of a gene not yet discovered in pig
RNA-Seq ChIP-Seq Sequence-Analysis Genome-Analysis
updated 8.1 years ago by ▴ 610 • written 8.1 years ago by ▴ 600
0
votes
1
reply
2.1k
views
Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.1 years ago by ChIP ▴ 600
19
votes
5
replies
26k
views
Hypergeometric Test On Gene Set
r statistics
updated 21 months ago by 44k • written 10.9 years ago by ▴ 600
2
votes
3
replies
7.7k
views
Quantification of RNA-Seq bam files (STAR + HTSeq count)
RNA-Seq HTSeq_count STAR
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 600
3
votes
6
replies
9.4k
views
How to normalise read count per gene
RNA-Seq
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 600
4
votes
5
replies
5.2k
views
Heatmap of Differentially Expressed Genes
RNA-Seq R heatmap
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
1
reply
5.2k
views
Comment: C: Heatmap of Differentially Expressed Genes
9.0 years ago by ChIP ▴ 600
0
votes
0
replies
1.9k
views
Practical approaches to constructing regulatory networks using NGS data (ChIP and/or RNA Seq)
RNA-Seq ChIP-Seq Network Cytoscape
9.4 years ago by ChIP ▴ 600
10
votes
7
replies
8.0k
views
To get genes for each clusters from heatmap
heatmap R
updated 2.0 years ago by 44k • written 9.4 years ago by ▴ 600
0
votes
0
replies
8.0k
views
Comment: C: To get genes for each clusters from heatmap
9.4 years ago by ChIP ▴ 600
0
votes
0
replies
4.7k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 2.7 years ago by 44k • written 9.4 years ago by ▴ 600
0
votes
1
reply
4.7k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 2.7 years ago by 44k • written 9.4 years ago by ▴ 600
0
votes
1
reply
1.8k
views
Suggestion Needed For Mirna Expression Data
mirna gene-expression
updated 9.5 years ago by 20 • written 12.2 years ago by ▴ 600
2
votes
6
replies
3.5k
views
Paired end data loaded into geo as single end runs ... How to extraxct the data
Samtools RNA-Seq Picard
updated 23 months ago by 44k • written 9.9 years ago by ▴ 600
14
votes
18
replies
15k
views
10 follow
Plotting Reads Around Tss
chip-seq
updated 23 months ago by 44k • written 11.1 years ago by ▴ 600
3
votes
3
replies
9.1k
views
Trimming read length & quality in a FASTQ file
RNA-Seq next-gen
updated 21 months ago by 44k • written 9.6 years ago by ▴ 600
1
vote
2
replies
1.6k
views
Can a bioinformatics analysis based on 2 patient samples be published
next-gen Publications
updated 21 months ago by 44k • written 9.6 years ago by ▴ 600
14
votes
14
replies
4.7k
views
Heatmap to identify differential regions between 2 groups
heatmap R
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 600
0
votes
1
reply
2.6k
views
Comment: Comment: Converting Solexa eland to Solexa fastq
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
1
vote
4
replies
2.6k
views
Converting Solexa eland to Solexa fastq
perl python awk R
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
11
votes
7
replies
13k
views
List Of Genes Involved In Metabolic Pathway
pathway enrichment
updated 2.7 years ago by 44k • written 11.5 years ago by ▴ 600
0
votes
0
replies
3.5k
views
Comment: Comment: Paired end data loaded into geo as single end runs ... How to extraxct the data
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
0
votes
1
reply
3.5k
views
Comment: Comment: Paired end data loaded into geo as single end runs ... How to extraxct the data
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
1
vote
1
reply
3.6k
views
Comment: Comment: Error while converting FastqToSam
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
4
votes
3
replies
3.6k
views
Error while converting FastqToSam
Fastq Bam Picard
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
1
vote
0
replies
4.7k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 600
0
votes
0
replies
4.7k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 600
0
votes
0
replies
9.5k
views
Comment: Comment: Transforming Beta values to M values
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 600
4
votes
2
replies
9.5k
views
Transforming Beta values to M values
DNA-Methylation
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 600
0
votes
0
replies
2.4k
views
Difference between the PFam domain information from UCSC and PDB site
Protein domains SNPs
updated 3.6 years ago by 44k • written 10.0 years ago by ▴ 600
5
votes
11
replies
9.3k
views
Copy Number Variation from paired end RNA-Seq data
SNP RNA-Seq CNV
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 600
100 results • Page 1 of 2
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