Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
2
replies
1.7k
views
cd-hit-est total seq value doesn't match number of sequences being compared?
metagenomics cd-hit-est CD-HIT binning filtering
updated 10 months ago by • 0 • written 6.1 years ago by ▴ 60
4
votes
15
replies
7.8k
views
8 follow
bbmap split paired-end reads back into separated fastq files?
genome next-gen-sequencing bbmap alignment
updated 11 months ago by 147k • written 6.2 years ago by ▴ 60
1
vote
2
replies
698
views
How to plot two categorical variables in ggridges?
R ggridges ggplot2
updated 13 months ago by 4.0k • written 13 months ago by ▴ 60
0
votes
2
replies
833
views
Dual-RNA seq with bacteria and fungi- can you split co-culture libraries for DGE comparisons?
illumina R RNA-seq DGE transcriptomics
updated 3.2 years ago by 9.0k • written 3.2 years ago by ▴ 60
0
votes
7
replies
2.4k
views
What are the input files for lwaldron / metaphlanToPhyloseq.R ?
r metagenomics metaphlan
updated 3.4 years ago by • 0 • written 4.3 years ago by ▴ 60
0
votes
0
replies
960
views
Comment: Comment: fastq-dump for downloading multiple sets reads?
3.6 years ago by c.e.chong ▴ 60
1
vote
2
replies
960
views
fastq-dump for downloading multiple sets reads?
illumina ncbi fastq-dump genomes
3.6 years ago by c.e.chong ▴ 60
1
vote
1
reply
6.2k
views
Comment: C: Import metaphlan output to phyloseq
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
6.2k
views
Comment: C: Import metaphlan output to phyloseq
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
4.4k
views
Comment: C: Importing MetaPhlAn3 profile table into phyloseq to use decontam
4.3 years ago by c.e.chong ▴ 60
0
votes
0
replies
2.4k
views
Comment: C: What are the input files for lwaldron / metaphlanToPhyloseq.R ?
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.4k
views
Comment: C: What are the input files for lwaldron / metaphlanToPhyloseq.R ?
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.4k
views
Comment: C: What are the input files for lwaldron / metaphlanToPhyloseq.R ?
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
4.4k
views
Comment: C: Importing MetaPhlAn3 profile table into phyloseq to use decontam
4.3 years ago by c.e.chong ▴ 60
0
votes
1
reply
4.4k
views
Comment: C: Importing MetaPhlAn3 profile table into phyloseq to use decontam
4.3 years ago by c.e.chong ▴ 60
1
vote
1
reply
1.8k
views
Taxonomic classification of MAGs
metagenomics genome taxonomy binning
updated 4.3 years ago by ★ 28k • written 4.3 years ago by ▴ 60
0
votes
1
reply
1.4k
views
Comment: C: Creating a bed file from a de novo fasta file
4.4 years ago by c.e.chong ▴ 60
0
votes
1
reply
1.4k
views
Comment: C: Creating a bed file from a de novo fasta file
4.4 years ago by c.e.chong ▴ 60
0
votes
1
reply
1.4k
views
Comment: C: Creating a bed file from a de novo fasta file
4.4 years ago by c.e.chong ▴ 60
0
votes
7
replies
1.4k
views
Creating a bed file from a de novo fasta file
assembly bedtools metagenomics
4.4 years ago by c.e.chong ▴ 60
0
votes
3
replies
2.3k
views
Ways to convert fasta to faa file for functional annotation?
pangenome Roary Assembly annotation
updated 4.6 years ago by 20 • written 4.7 years ago by ▴ 60
0
votes
0
replies
2.3k
views
Comment: C: Ways to convert fasta to faa file for functional annotation?
4.7 years ago by c.e.chong ▴ 60
0
votes
0
replies
13k
views
Comment: C: How to generate Artemis ACT comparison file of multiple sequence alignment
5.1 years ago by c.e.chong ▴ 60
0
votes
2
replies
13k
views
Comment: C: How to generate Artemis ACT comparison file of multiple sequence alignment
5.1 years ago by c.e.chong ▴ 60
0
votes
0
replies
1.2k
views
Comment: C: Bowtie database of all bacterial and fungal complete genomes
5.4 years ago by c.e.chong ▴ 60
1
vote
2
replies
1.2k
views
Bowtie database of all bacterial and fungal complete genomes
Bowtie2 metagenomics mapping shotgun
5.4 years ago by c.e.chong ▴ 60
0
votes
1
reply
6.7k
views
Comment: C: Kraken2 to Phyloseq
5.4 years ago by c.e.chong ▴ 60
0
votes
1
reply
6.7k
views
Comment: C: Kraken2 to Phyloseq
5.5 years ago by c.e.chong ▴ 60
7
votes
5
replies
6.7k
views
Kraken2 to Phyloseq
R shotgun metagenomics statistics kraken
updated 5.5 years ago by 10k • written 5.5 years ago by ▴ 60
0
votes
0
replies
3.9k
views
Comment: C: Java error message when using BBDuk
5.7 years ago by c.e.chong ▴ 60
0
votes
1
reply
3.9k
views
Comment: C: Java error message when using BBDuk
5.7 years ago by c.e.chong ▴ 60
2
votes
8
replies
3.9k
views
Java error message when using BBDuk
genome bbduk QC java bbtools
updated 5.7 years ago by 147k • written 5.7 years ago by ▴ 60
0
votes
1
reply
3.9k
views
Comment: C: Java error message when using BBDuk
updated 5.7 years ago by 147k • written 5.7 years ago by ▴ 60
0
votes
1
reply
3.9k
views
Comment: C: Java error message when using BBDuk
5.7 years ago by c.e.chong ▴ 60
1
vote
1
reply
2.9k
views
Roary MSG: Got a sequence without letters. Could not guess alphabet
genome pangenome Assembly software error
5.8 years ago by c.e.chong ▴ 60
0
votes
0
replies
2.0k
views
Comment: C: Using VelvetOptimiser.pl within a forloop
5.9 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.0k
views
Comment: C: Using VelvetOptimiser.pl within a forloop
updated 5.9 years ago by 21k • written 5.9 years ago by ▴ 60
0
votes
0
replies
2.0k
views
Comment: C: Using VelvetOptimiser.pl within a forloop
5.9 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.0k
views
Comment: C: Using VelvetOptimiser.pl within a forloop
5.9 years ago by c.e.chong ▴ 60
7
votes
8
replies
2.0k
views
Using VelvetOptimiser.pl within a forloop
sequencing assembly velvet
5.9 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.9k
views
Comment: C: samtools sort: legacy usage
6.1 years ago by c.e.chong ▴ 60
0
votes
0
replies
2.9k
views
Comment: C: samtools sort: legacy usage
6.1 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.9k
views
Comment: C: samtools sort: legacy usage
6.1 years ago by c.e.chong ▴ 60
0
votes
1
reply
2.9k
views
Comment: C: samtools sort: legacy usage
6.1 years ago by c.e.chong ▴ 60
4
votes
9
replies
2.9k
views
samtools sort: legacy usage
samtools metagenomics genome sort
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 60
0
votes
0
replies
7.8k
views
Comment: C: bbmap split paired-end reads back into separated fastq files?
6.2 years ago by c.e.chong ▴ 60
0
votes
1
reply
7.8k
views
Comment: C: bbmap split paired-end reads back into separated fastq files?
6.2 years ago by c.e.chong ▴ 60
47 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6