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Does it make sense to repeat the assembly step in variant calling?
variant calling
updated 4.9 years ago by 20 • written 5.8 years ago by ▴ 30
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Comment: C: Does it make sense to repeat the assembly step in variant calling?
5.8 years ago by ajuiwl ▴ 30
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1.9k
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Consensus VCF file from several variant callers
vcf variant calling GATK Freebayes
updated 6.0 years ago by 164k • written 6.0 years ago by ▴ 30
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0
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5.1k
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Comment: C: Filter VCF with bash commands
6.1 years ago by ajuiwl ▴ 30
10
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15
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5.1k
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Filter VCF with bash commands
vcf awk grep bash
updated 6.1 years ago by 15k • written 6.1 years ago by ▴ 30
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5.1k
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Comment: C: Filter VCF with bash commands
6.1 years ago by ajuiwl ▴ 30
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5.1k
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Comment: C: Filter VCF with bash commands
6.1 years ago by ajuiwl ▴ 30
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5.1k
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Answer: A: Filter VCF with bash commands
6.1 years ago by ajuiwl ▴ 30
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1
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1.2k
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DP and DP at site do not match using only 1 sample in VCF
VCF variant calling GATK
6.1 years ago by ajuiwl ▴ 30
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1.4k
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Comment: C: 4/6 genotype in VCF
6.2 years ago by ajuiwl ▴ 30
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6
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1.4k
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4/6 genotype in VCF
vcf variant calling genotype
updated 6.2 years ago by 164k • written 6.2 years ago by ▴ 30
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