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7
votes
2
replies
6.5k
views
Trimming by fastp for multiple PE fastq.gz files using shell script
shell fastp RNA-Seq bash
written 6.1 years ago by ▴ 50
0
votes
0
replies
397
views
bsseq: Failing to reproduce the results
sequencing EM-seq Differentially Methylated bisulfite DMRs bsseq Regions
2.8 years ago by Mithil Gaikwad ▴ 50
2
votes
2
replies
2.5k
views
'gene_name' is missing in StringTie output file 't_data.ctab'
RNA-Seq StringTie New Tuxedo protocol DESeq2
written 6.0 years ago by ▴ 50
0
votes
0
replies
3.7k
views
Comment: C: Volcano plot: Using Multiple results
5.3 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.7k
views
Comment: C: Volcano plot: Using Multiple results
5.3 years ago by Mithil Gaikwad ▴ 50
5
votes
4
replies
3.7k
views
Volcano plot: Using Multiple results
RNA-Seq Microarray Volcanoplot
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by ▴ 50
0
votes
0
replies
3.0k
views
Comment: C: MarkDuplicates: Mates are missing
5.5 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
3.0k
views
Comment: C: MarkDuplicates: Mates are missing
5.5 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
3.0k
views
Comment: C: MarkDuplicates: Mates are missing
updated 5.5 years ago by 85k • written 5.5 years ago by ▴ 50
0
votes
6
replies
3.0k
views
MarkDuplicates: Mates are missing
rna-seq trimmomatic Hisat2 picardtools samtools
5.5 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.3k
views
free(): invalid next size (normal) Aborted (core dumped)
cufflinks gffread memory_allocation fetchFASTA
5.6 years ago by Mithil Gaikwad ▴ 50
1
vote
1
reply
2.4k
views
Warning: gene "NR_111945" (on chr1) has reference transcripts on both strands?
RNA-Seq Stringtie
updated 5.7 years ago by 104k • written 5.7 years ago by ▴ 50
0
votes
1
reply
4.6k
views
Hisat2 after the use of trimmomatic software: (ERR): hisat2-align exited with value 134
trimmomatic RNA-Seq Hisat2 new tuxedo protocol
updated 5.8 years ago by 85k • written 5.8 years ago by ▴ 50
0
votes
1
reply
2.8k
views
Comment: C: What can be done to separate the healthy and patient samples in PCA plot and Dis
5.9 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
2.8k
views
Comment: C: What can be done to separate the healthy and patient samples in PCA plot and Dis
5.9 years ago by Mithil Gaikwad ▴ 50
1
vote
6
replies
2.8k
views
What can be done to separate the healthy and patient samples in PCA plot and Distance matrix
RNA-Seq DESeq2 PCA plot Distance matrix
5.9 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
2.0k
views
Comment: C: Strand specific in RNA-seq
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
2.0k
views
Comment: C: Strand specific in RNA-seq
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
2.0k
views
Comment: C: Strand specific in RNA-seq
6.0 years ago by Mithil Gaikwad ▴ 50
2
votes
7
replies
2.0k
views
Strand specific in RNA-seq
featureCounts subread RNA-Seq
updated 6.0 years ago by ★ 1.9k • written 6.0 years ago by ▴ 50
1
vote
1
reply
19k
views
Comment: C: featureCounts strand specificity
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.4k
views
Comment: C: Error while loading the data structrure in the ballgown tool
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
1
reply
3.4k
views
Comment: C: Error while loading the data structrure in the ballgown tool
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.3k
views
Comment: C: Error in prepDE.py in Tuxedo protocol after StringTie quantification
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.3k
views
Comment: C: Error in prepDE.py in Tuxedo protocol after StringTie quantification
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.3k
views
Comment: C: Error in prepDE.py in Tuxedo protocol after StringTie quantification
6.0 years ago by Mithil Gaikwad ▴ 50
4
votes
8
replies
3.3k
views
Error in prepDE.py in Tuxedo protocol after StringTie quantification
DESeq2 StringTie new Tuxedo protocol RNA-Seq
updated 6.0 years ago by 47k • written 6.0 years ago by ▴ 50
1
vote
1
reply
9.5k
views
Comment: C: Ballgown Error in file(file, "rt") : invalid 'description' argument
6.0 years ago by Mithil Gaikwad ▴ 50
7
votes
12
replies
3.4k
views
Error while loading the data structrure in the ballgown tool
RNA-Seq ballgown new tuxedo pipeline
updated 6.0 years ago by 5.9k • written 6.0 years ago by ▴ 50
0
votes
0
replies
3.4k
views
Comment: A: Error while loading the data structrure in the ballgown tool
6.0 years ago by Mithil Gaikwad ▴ 50
0
votes
0
replies
3.4k
views
Comment: A: Error while loading the data structrure in the ballgown tool
6.0 years ago by Mithil Gaikwad ▴ 50
31 results • Page 1 of 1
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