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Linear Mixed-effects Modelling for Mouse Tumor Growth Data
lmerTest modelling mixed-effects lme4
7 weeks ago by BioNovice247 ▴ 20
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629
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Comment: Comment: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
5 months ago by BioNovice247 ▴ 20
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5
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629
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DESeq2_ How to Account for the Expression Levels of a Specific Gene?
Differential-Expression-Analysis DESeq2
updated 5 months ago by ★ 18k • written 5 months ago by ▴ 20
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Comment: Comment: Linear Mixed-Effects Model Coefficient Interpretation
9 months ago by BioNovice247 ▴ 20
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2
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785
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Linear Mixed-Effects Model Coefficient Interpretation
LMER mixed-effects R modeling
9 months ago by BioNovice247 ▴ 20
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1
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1.8k
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How should the the correlation of module eigengenes with categorical external traits be assessed in WGCNA?
RNA-seq Correlation WGCNA
updated 2.5 years ago by ▴ 80 • written 2.5 years ago by ▴ 20
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722
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When do we consider TCGA mRNA and miRNA data as matched samples?
TCGA GDC RNA-seq mRNA miRNA
updated 2.7 years ago by ★ 1.2k • written 3.0 years ago by ▴ 20
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How to prepare the data prior to Quantile Normalization for comparisons across studies/platforms ?
microarray normalization RNA-seq Quantile-normalization quantile
2.9 years ago by BioNovice247 ▴ 20
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912
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Comment: Comment: Normalization of RNA-seq data across tumors. Should I pool the samples?
3.0 years ago by BioNovice247 ▴ 20
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2
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912
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Normalization of RNA-seq data across tumors. Should I pool the samples?
DESeq2 TCGA RNA-seq VST Normalization
3.0 years ago by BioNovice247 ▴ 20
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57k
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Comment: Comment: PCA plot from read count matrix from RNA-Seq
3.0 years ago by BioNovice247 ▴ 20
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1.9k
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Comment: Comment: What is the most appropriate method for correlation analysis of mRNA-target corr
3.1 years ago by BioNovice247 ▴ 20
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1.9k
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Comment: Comment: What is the most appropriate method for correlation analysis of mRNA-target corr
3.1 years ago by BioNovice247 ▴ 20
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4
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1.9k
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What is the most appropriate method for correlation analysis of mRNA-target correlations? And why?
data pearson spearman expression correlation kendall
3.1 years ago by BioNovice247 ▴ 20
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1.8k
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Comment: Comment: How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
3.1 years ago by BioNovice247 ▴ 20
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1.8k
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Comment: Comment: How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
3.1 years ago by BioNovice247 ▴ 20
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4
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1.8k
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How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
DESeq2 TMM Kallisto edgeR
3.1 years ago by BioNovice247 ▴ 20
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