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3
votes
5
replies
7.7k
views
Creating assembly graphs .gfa
assembly gfa graph bandage visualization
updated 17 months ago by ▴ 40 • written 5.4 years ago by ▴ 80
0
votes
0
replies
5.3k
views
Comment: C: how to get database of plants in FASTA format from uniprot
4.4 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.3k
views
Comment: C: Mapping (minimap2) nanopore reads to parent species to confirm hybridization
4.4 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
7.9k
views
Comment: C: MAKER annotation post processing (AED score)
4.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
8.4k
views
Answer: A: Principle Component Analysis (PCA) for GWAS (SNP genotype data)
4.8 years ago by ricardoguerreiro2121 ▴ 80
1
vote
2
replies
3.3k
views
Mapping (minimap2) nanopore reads to parent species to confirm hybridization
hybrids long reads parents minimap2
5.1 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
2.1k
views
Comment: C: Multiple mapping with longreads - Get primary mapping
5.3 years ago by ricardoguerreiro2121 ▴ 80
1
vote
2
replies
2.1k
views
Multiple mapping with longreads - Get primary mapping
mapping minimap2 long reads pacbio samtools
updated 5.3 years ago by 48k • written 5.3 years ago by ▴ 80
0
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0
replies
7.7k
views
Comment: C: Creating assembly graphs .gfa
5.3 years ago by ricardoguerreiro2121 ▴ 80
0
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0
replies
61k
views
Comment: C: What are chimeric reads?
5.4 years ago by ricardoguerreiro2121 ▴ 80
0
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0
replies
5.6k
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Comment: C: Reference-guided assembly from short reads
5.4 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
5.5k
views
Comment: C: Trimming out primer sequences in the middle of reads
5.4 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
1.4k
views
Answer: A: Extracting homologous proteins from genome ( blat or exonerate)
5.4 years ago by ricardoguerreiro2121 ▴ 80
3
votes
2
replies
1.4k
views
Extracting homologous proteins from genome ( blat or exonerate)
blat genome proteins phylogeny exonerate
5.4 years ago by ricardoguerreiro2121 ▴ 80
3
votes
1
reply
1.1k
views
Is Genome heterozygosity a problem for gene annotation?
heterozygosity diploid genome gene annotation
updated 5.4 years ago by 15k • written 5.4 years ago by ▴ 80
0
votes
1
reply
9.4k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
5.4 years ago by ricardoguerreiro2121 ▴ 80
2
votes
0
replies
9.4k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
5.5 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
13k
views
Comment: C: Create de novo repeat library
5.5 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
5.3k
views
Answer: A: how to get database of plants in FASTA format from uniprot
5.6 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
1.6k
views
HMMER esl-fetch corrupt coords
HHMER ESL
5.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.1k
views
Answer: A: Alternatives to RepeatModeler / nseg install fail
5.8 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
2.7k
views
Maker (Gene annotation) RepeatMasker error
maker gene annotation repeatmasker
5.8 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
2.9k
views
Answer: A: pacbio-illumina hybrid assemblies
6.0 years ago by ricardoguerreiro2121 ▴ 80
5
votes
9
replies
3.3k
views
Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
VariantAnnotation bioconductor vcf
6.3 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.3k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.3 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.3k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.3 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
3.3k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.3 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
3.3k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.3 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
2.2k
views
Comment: C: Sequence identity between sequences with different lengths
6.4 years ago by ricardoguerreiro2121 ▴ 80
6
votes
5
replies
2.2k
views
Sequence identity between sequences with different lengths
sequence identity alignment filter mummer
updated 6.4 years ago by 6.4k • written 6.4 years ago by ▴ 80
0
votes
0
replies
3.9k
views
Comment: C: Pysam VariantFile.fetch() without specifying contig
6.4 years ago by ricardoguerreiro2121 ▴ 80
4
votes
2
replies
3.9k
views
Pysam VariantFile.fetch() without specifying contig
pysam python vcf
6.4 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
12k
views
Comment: C: Capping coverage in bam file
6.6 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
12k
views
Comment: C: Capping coverage in bam file
6.6 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
12k
views
Comment: C: Capping coverage in bam file
6.6 years ago by ricardoguerreiro2121 ▴ 80
35 results • Page 1 of 1
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