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1.1k
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Comment:
Comment: Ensembl Ref/alt allele discrepancy
16 months ago by
patelk26
▴ 320
0
votes
6
replies
1.1k
views
Ensembl Ref/alt allele discrepancy
Ensembl
INDEL
dbSNP
VCF
variant
updated 6 months ago by
Mwangana
• 0 • written 16 months ago by
patelk26
▴ 320
0
votes
0
replies
1.1k
views
Comment:
Comment: Ensembl Ref/alt allele discrepancy
16 months ago by
patelk26
▴ 320
0
votes
0
replies
849
views
Comment:
Comment: gene name of DEG ID
2.5 years ago by
patelk26
▴ 320
0
votes
1
reply
1.4k
views
How to interpret Nucleosome banding pattern in scATAC-Seq?
single-cell
scATAC-Seq
Signac
transcriptomics
updated 13 months ago by
Prakki Rama
★ 2.7k • written 3.1 years ago by
patelk26
▴ 320
0
votes
0
replies
1.5k
views
Comment:
Comment: which tool can I use to detect CNVs?
3.2 years ago by
patelk26
▴ 320
0
votes
1
reply
1.5k
views
Comment:
Comment: which tool can I use to detect CNVs?
3.3 years ago by
patelk26
▴ 320
1
vote
2
replies
6.6k
views
Comment:
Comment: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
3.4 years ago by
patelk26
▴ 320
2
votes
0
replies
1.6k
views
Comment:
Comment: How to interpret bimodal distribution of GC-content for RNAseq and can it be rem
3.4 years ago by
patelk26
▴ 320
2
votes
2
replies
1.9k
views
Change STAR Parameters in rsem-calculate-expression
RNA-Seq
RSEM
STAR
updated 3.4 years ago by
Jeremy Leipzig
22k • written 3.4 years ago by
patelk26
▴ 320
0
votes
1
reply
2.6k
views
Comment:
Comment: down regulated and up regulated using r
3.4 years ago by
patelk26
▴ 320
1
vote
0
replies
4.0k
views
Comment:
Comment: Understanding Seurat Object
3.7 years ago by
patelk26
▴ 320
6
votes
2
replies
4.0k
views
Understanding Seurat Object
RNA-Seq
singlecell
Seurat
3.7 years ago by
patelk26
▴ 320
3
votes
0
replies
1.8k
views
Comment:
Comment: Is there any gene nomenclature conversion tool that recognizes old names?
3.7 years ago by
patelk26
▴ 320
2
votes
0
replies
7.0k
views
Comment:
Comment: Translating gene names to entrez id's
3.7 years ago by
patelk26
▴ 320
2
votes
1
reply
1.4k
views
Answer:
C: A layman trying to understand what a FASTA file is
3.8 years ago by
patelk26
▴ 320
2
votes
1
reply
1.3k
views
Answer:
C: Deleting text from row.names in a dataframe
3.8 years ago by
patelk26
▴ 320
0
votes
1
reply
1.7k
views
Comment:
C: readVCF in PopGenome can't open VCF file
3.8 years ago by
patelk26
▴ 320
1
vote
0
replies
1.2k
views
Comment:
C: How to analyse a list of GO terms
3.8 years ago by
patelk26
▴ 320
0
votes
0
replies
1.7k
views
Comment:
C: More Ensembl IDs than genes
4.3 years ago by
patelk26
▴ 320
0
votes
0
replies
1.7k
views
Comment:
C: More Ensembl IDs than genes
4.3 years ago by
patelk26
▴ 320
2
votes
4
replies
1.7k
views
More Ensembl IDs than genes
genome
next-gen
gene
4.3 years ago by
patelk26
▴ 320
0
votes
1
reply
2.5k
views
Answer:
A: Obtaining gene expression data from GEO
4.5 years ago by
patelk26
▴ 320
0
votes
0
replies
1.1k
views
Answer:
A: How to get gene and microRNA expression profiles for specific type of cancers fr
4.5 years ago by
patelk26
▴ 320
1
vote
1
reply
967
views
CNV callers for WES data
WES
R
CNV
next-gen
4.5 years ago by
patelk26
▴ 320
0
votes
0
replies
1000
views
Comment:
C: Merge columns adding conditions for every row
4.9 years ago by
patelk26
▴ 320
1
vote
1
reply
1000
views
Answer:
C: Merge columns adding conditions for every row
4.9 years ago by
patelk26
▴ 320
0
votes
1
reply
1.9k
views
Comment:
C: How to order rows in a dot plot with ggplot2
updated 4.9 years ago by
Kevin Blighe
88k • written 4.9 years ago by
patelk26
▴ 320
0
votes
1
reply
1.5k
views
Answer:
A: Get SVG image of motif
5.1 years ago by
patelk26
▴ 320
0
votes
2
replies
2.1k
views
Comment:
C: Rename fasta headers using a variable already present in the header?
5.2 years ago by
patelk26
▴ 320
1
vote
1
reply
1.3k
views
Answer:
A: Affymetrix probesets to Gene symbols
5.2 years ago by
patelk26
▴ 320
1
vote
0
replies
895
views
Comment:
C: How to create matrix for larger data set?
5.2 years ago by
patelk26
▴ 320
2
votes
1
reply
1.2k
views
Answer:
A: sed command to extract sequence
5.2 years ago by
patelk26
▴ 320
1
vote
1
reply
1.4k
views
Answer:
A: How to identify Transcript Factors (TF) binding to my target sequence
5.2 years ago by
patelk26
▴ 320
1
vote
0
replies
4.7k
views
Comment:
C: convert rows to columns in r
5.2 years ago by
patelk26
▴ 320
0
votes
0
replies
3.1k
views
Comment:
C: snakemake and Star aligner code issue
5.3 years ago by
patelk26
▴ 320
0
votes
1
reply
3.1k
views
Comment:
C: snakemake and Star aligner code issue
5.3 years ago by
patelk26
▴ 320
1
vote
1
reply
1.1k
views
Comment:
C: How to handle several measurements of the same gene on one DNA microarray?
5.3 years ago by
patelk26
▴ 320
1
vote
1
reply
3.2k
views
Comment:
C: Microarray Probes to Ensembl ID or Gene ID
5.3 years ago by
patelk26
▴ 320
3
votes
1
reply
6.1k
views
How to interpret CERES gene scores for genome wide CRISPR-Cas9 knockout screens?
CRISPR
5.5 years ago by
patelk26
▴ 320
3
votes
0
replies
6.1k
views
Answer:
A: How to interpret CERES gene scores for genome wide CRISPR-Cas9 knockout screens?
5.5 years ago by
patelk26
▴ 320
0
votes
0
replies
1.8k
views
Comment:
C: How to Analyze list of ATAC-seq peaks for specific motifs list?
5.8 years ago by
patelk26
▴ 320
0
votes
0
replies
4.5k
views
Comment:
C: Error while annotating with Chipseeker
5.8 years ago by
patelk26
▴ 320
0
votes
1
reply
4.5k
views
Comment:
C: Error while annotating with Chipseeker
5.8 years ago by
patelk26
▴ 320
1
vote
1
reply
4.5k
views
Comment:
C: Error while annotating with Chipseeker
5.8 years ago by
patelk26
▴ 320
0
votes
0
replies
4.2k
views
Answer:
A: Taking information from a .txt and converting it to fasta
5.8 years ago by
patelk26
▴ 320
2
votes
0
replies
2.7k
views
Answer:
A: MSTRGs are plaguing my RNA-Seq analysis
6.0 years ago by
patelk26
▴ 320
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