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Comment: C: RPKM and TPM when operating with small group of genes: is there a bias?
4.4 years ago by Gautier Richard ▴ 370
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Comment: C: RPKM and TPM when operating with small group of genes: is there a bias?
4.4 years ago by Gautier Richard ▴ 370
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Comment: C: Deeptools correlation plot: between RNAseq and H3K27ac ChIPseq
4.4 years ago by Gautier Richard ▴ 370
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Answer: A: DMR detection tools for whole genome bisulphite sequencing data in Plants
4.4 years ago by Gautier Richard ▴ 370
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Answer: A: data format for ggupset
4.4 years ago by Gautier Richard ▴ 370
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Comment: C: "bowtie2 died with signal 9 (KILL)" error message, having trouble figuring out h
6.0 years ago by Gautier Richard ▴ 370
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Answer: A: What tool can be used to predct regulatory element within an input sequence ?
6.0 years ago by Gautier Richard ▴ 370
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Comment: C: Remove duplicates in an extremely large text file
6.0 years ago by Gautier Richard ▴ 370
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7.3k
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Comment: C: "bowtie2 died with signal 9 (KILL)" error message, having trouble figuring out h
6.0 years ago by Gautier Richard ▴ 370
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1
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7.3k
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Comment: C: "bowtie2 died with signal 9 (KILL)" error message, having trouble figuring out h
6.0 years ago by Gautier Richard ▴ 370
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1.4k
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Comment: C: RNA-Seq Differential gene expression
6.1 years ago by Gautier Richard ▴ 370
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1.8k
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Comment: C: How to plot gene cluster
6.1 years ago by Gautier Richard ▴ 370
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Answer: A: Per-base coverage to bedgraph or bigwig
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Calculating TPM from featureCounts output
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Analysis pipeline for 3e Hi-C
6.1 years ago by Gautier Richard ▴ 370
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1.8k
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Comment: C: Analysis pipeline for 3e Hi-C
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Hi-C data alignment with star
6.1 years ago by Gautier Richard ▴ 370
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1.8k
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Comment: C: Identify genes with chip signal > input prior to peak calling
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: DESEQ2 design analysis
6.1 years ago by Gautier Richard ▴ 370
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Answer: C: juicer.sh problem !
6.1 years ago by Gautier Richard ▴ 370
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Answer: A: .mcool to .hic
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: RIblast output Circos plot
6.1 years ago by Gautier Richard ▴ 370
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2.1k
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Answer: A: RIblast output Circos plot
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Differentially expressed genes interactome
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: DESEQ2 design analysis
6.1 years ago by Gautier Richard ▴ 370
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3.9k
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Answer: A: R for loop
6.1 years ago by Gautier Richard ▴ 370
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3.9k
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Comment: C: R for loop
6.1 years ago by Gautier Richard ▴ 370
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Forum: "+1" button unavailable for answers on mobile?
meta biostars
updated 21 months ago by 44k • written 6.1 years ago by ▴ 370
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Comment: C: Extract novel motifs from protein multiple sequence alignment
6.1 years ago by Gautier Richard ▴ 370
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Answer: A: Find the 3' utrs, 5'utrs and their counts from bam files
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Hi-C data alignment with star
6.1 years ago by Gautier Richard ▴ 370
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3.2k
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Answer: A: Hi-C data alignment with star
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: how to provide background genes to do GO by david
6.1 years ago by Gautier Richard ▴ 370
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Answer: A: MEME-Chip output lacks motif names
6.1 years ago by Gautier Richard ▴ 370
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Comment: C: Mapping DNAseq reads on cds ?
6.1 years ago by Gautier Richard ▴ 370
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2.1k
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Answer: A: Compare SE and PE gene expression data.
6.1 years ago by Gautier Richard ▴ 370
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