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Comment: Comment: Physical Protein size
13 months ago by Gabriel ▴ 170
2
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5
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1.4k
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Physical Protein size
proteomics databases
updated 13 months ago by 55k • written 14 months ago by ▴ 170
0
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1
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1.2k
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Best database for mouse scRNA-seq gene expression data ?
mouse atlas
updated 3.0 years ago by ▴ 110 • written 3.0 years ago by ▴ 170
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0
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447
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What are Acceptable QC stats for 10x scRNA-seq data?
doublets scRNAseq lysate nUMI
3.1 years ago by Gabriel ▴ 170
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0
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1.2k
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Comment: Comment: What is a suitable metric to compute a cell-to-cell distance matrix
3.2 years ago by Gabriel ▴ 170
3
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2
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1.2k
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What is a suitable metric to compute a cell-to-cell distance matrix
seurat KNN scran SNN adjacency
3.2 years ago by Gabriel ▴ 170
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0
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1.7k
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Comment: Comment: How to Estimate total variance in, and between RNA-seq datasets?
4.0 years ago by Gabriel ▴ 170
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1
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1.7k
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Comment: Comment: How to Estimate total variance in, and between RNA-seq datasets?
4.0 years ago by Gabriel ▴ 170
0
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4
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1.7k
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How to Estimate total variance in, and between RNA-seq datasets?
batch variance correction
4.0 years ago by Gabriel ▴ 170
0
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0
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1.7k
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Comment: Comment: Using Statistical enrichment test for groups Principal Component Analysis
4.0 years ago by Gabriel ▴ 170
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0
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1.7k
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Comment: Comment: Using Statistical enrichment test for groups Principal Component Analysis
4.0 years ago by Gabriel ▴ 170
0
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5
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1.7k
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Using Statistical enrichment test for groups Principal Component Analysis
PCA
4.0 years ago by Gabriel ▴ 170
12
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8
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6.5k
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Is there a way to visualize log fold changes for Reactome pathways in R?
pathview RNA-Seq reactome bioconductor
updated 4.1 years ago by ▴ 440 • written 5.9 years ago by ▴ 170
1
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1
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4.1k
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Cellranger output .bam file does Not contain barcodes ( CB and UB )
cellranger barcodes Velocyto chromium10x UMI
4.4 years ago by Gabriel ▴ 170
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3
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2.3k
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iSEE singlecellexperiment GUI app on shinyapps not working, Troubleshooting
iSEE shiny scRNAseq
updated 4.5 years ago by ▴ 10 • written 4.5 years ago by ▴ 170
3
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3
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2.5k
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Is there a package for ORA where I can supply my own gmt files?
GO ORA geneset bioconductor gmt files
updated 4.8 years ago by ▴ 20 • written 5.1 years ago by ▴ 170
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1
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1.8k
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Comment: C: What causes strange oscillations in the count distribution of Salmon and STAR al
5.0 years ago by Gabriel ▴ 170
1
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6
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1.8k
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What causes strange oscillations in the count distribution of Salmon and STAR aligned gene tables?
salmon STAR counts filtering HTSeq
5.0 years ago by Gabriel ▴ 170
2
votes
7
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1.5k
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Forum: Future prospects: NGS vs Gene editing (using CRISPR CAS9, AAVs and similar methods)
NGS CRISPR-Cas9
updated 22 months ago by 45k • written 5.5 years ago by ▴ 170
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3
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1.5k
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Comment: C: Future prospects: NGS vs Gene editing(using CRISPR CAS9, AAVs and similar method
5.5 years ago by Gabriel ▴ 170
0
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0
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2.1k
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Finding the official list of genes from Geneontology(GO) gene sets
GO genesets annotation RNA-Seq
updated 5.6 years ago by 20 • written 5.8 years ago by ▴ 170
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1
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1.3k
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Comment: C: Getting a list of up and down regulated genes in a pathway
5.8 years ago by Gabriel ▴ 170
2
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1
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1.3k
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Answer: A: Getting a list of up and down regulated genes in a pathway
5.8 years ago by Gabriel ▴ 170
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2
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56k
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Comment: A: Network plot from expression data in R using igraph
5.9 years ago by Gabriel ▴ 170
0
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1
reply
1.1k
views
How to get wikipathways without disease and cancer ontologies?
wikipathways RNA-Seq GSEA gene ontology
5.9 years ago by Gabriel ▴ 170
26
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10
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26k
views
6 follow
What is the best way to rank genes for GSEA?
GSEA GO Gene ranking RNA-Seq
updated 5 months ago by ▴ 70 • written 6.0 years ago by ▴ 170
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0
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2.0k
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Comment: C: What causes Linear relations on MAplots?
6.0 years ago by Gabriel ▴ 170
3
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5
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2.0k
views
What causes Linear relations on MAplots?
maplot RNA-Seq logfold change
6.0 years ago by Gabriel ▴ 170
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1
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2.0k
views
Comment: C: What causes Linear relations on MAplots?
6.0 years ago by Gabriel ▴ 170
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