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WNN (Seurat v4) vs. totalVI (scvi-tools) for CITE-seq data
10X single-cell seurat scRNAseq RNAseq
3.2 years ago by MutationalMeltdown ▴ 200
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648
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Normalisation for single nuclei RNA-seq
seurat scRNAseq RNAseq scanpy 10x
3.3 years ago by MutationalMeltdown ▴ 200
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
0
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
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7.2k
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Comment: Comment: Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
3.6 years ago by MutationalMeltdown ▴ 200
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15
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7.2k
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Single cell RNA-seq: how many PCs to use for t-SNE/UMAP?
umap pca scRNA-seq t-sne RNA-seq
3.6 years ago by MutationalMeltdown ▴ 200
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3.4k
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Comment: Comment: Best compression for single cell RNA-seq object
3.6 years ago by MutationalMeltdown ▴ 200
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3.4k
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Comment: Comment: Best compression for single cell RNA-seq object
3.6 years ago by MutationalMeltdown ▴ 200
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6
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3.4k
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Best compression for single cell RNA-seq object
seurat rna-seq scanpy single-cell scRNA-seq
updated 3.2 years ago by • 0 • written 3.6 years ago by ▴ 200
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3.5k
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Comment: C: Want to reverse the fasta sequence
3.7 years ago by MutationalMeltdown ▴ 200
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754
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Answer: A: Meaning of plus symbol "+" in bcl2fastq reported barcodes
4.0 years ago by MutationalMeltdown ▴ 200
2
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1
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754
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Meaning of plus symbol "+" in bcl2fastq reported barcodes
bcl2fastq demultiplexing sequencing illumina
4.0 years ago by MutationalMeltdown ▴ 200
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1
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6.0k
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Comment: C: Force directed graphs compared to other dimensionality reduction methods for scR
4.3 years ago by MutationalMeltdown ▴ 200
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6.0k
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Comment: C: Force directed graphs compared to other dimensionality reduction methods for scR
4.8 years ago by MutationalMeltdown ▴ 200
15
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5
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6.0k
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Force directed graphs compared to other dimensionality reduction methods for scRNA-seq
RNA-Seq scRNA-Seq single cell machine learning
updated 4.8 years ago by 27k • written 4.9 years ago by ▴ 200
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1.8k
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Comment: C: 'position-aware' aligning of sequences with letter annotations
4.9 years ago by MutationalMeltdown ▴ 200
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1.8k
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Comment: C: 'position-aware' aligning of sequences with letter annotations
4.9 years ago by MutationalMeltdown ▴ 200
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3.4k
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Comment: C: Understanding kallisto qc metrics in run_info.json
5.1 years ago by MutationalMeltdown ▴ 200
2
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2
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3.4k
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Understanding kallisto qc metrics in run_info.json
RNA-Seq kallisto scRNA-seq alignment
5.1 years ago by MutationalMeltdown ▴ 200
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1
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3.9k
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Comment: C: What does a 'normal' FASTQC report look like for scRNA-seq data?
5.3 years ago by MutationalMeltdown ▴ 200
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1
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3.9k
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Comment: C: What does a 'normal' FASTQC report look like for scRNA-seq data?
5.3 years ago by MutationalMeltdown ▴ 200
1
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6
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3.9k
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What does a 'normal' FASTQC report look like for scRNA-seq data?
RNA-Seq scRNA-seq fastqc fastq 10x
5.3 years ago by MutationalMeltdown ▴ 200
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10.0k
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Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
5.4 years ago by MutationalMeltdown ▴ 200
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1
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10.0k
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Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
5.4 years ago by MutationalMeltdown ▴ 200
2
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1
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4.6k
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Answer: A: Evolution of Biostars
5.7 years ago by MutationalMeltdown ▴ 200
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